Difference between revisions of "RME255"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME255 RME255] == * direction: ** LEFT-TO-RIGHT * common name: ** RME255 * Synonym(s): == Reaction...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME255 RME255] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** folate transformations II
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** RME255
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''9''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
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* [[1.5.1.20-RXN]]
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** 0.18 [[TTP]][c] '''+''' 0.32 [[DGTP]][c] '''+''' 0.32 [[DCTP]][c] '''+''' 1.372 [[ATP]][c] '''+''' 0.18 [[DATP]][c] '''+''' 2.372 [[WATER]][c] '''=>''' 1.372 [[Pi]][c] '''+''' 1.372 [[ADP]][c] '''+''' 2.372 [[PROTON]][c] '''+''' 1.0 [[PPI]][c] '''+''' 1.0 [[DNA-Holder]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_14582]]
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** 0.18 dTTP[c] '''+''' 0.32 dGTP[c] '''+''' 0.32 dCTP[c] '''+''' 1.372 ATP[c] '''+''' 0.18 dATP[c] '''+''' 2.372 H2O[c] '''=>''' 1.372 phosphate[c] '''+''' 1.372 ADP[c] '''+''' 2.372 H+[c] '''+''' 1.0 diphosphate[c] '''+''' 1.0 DNA[c]
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*** [[Tiso_gene_16954]]
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** 4 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** [[manual-primary_network]]
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== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
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* Category: [[manual]]
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*** [[orthology-esiliculosus]]
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** Source: [[manual-primary_network]]
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* [[DIHYDROFOLATEREDUCT-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[FORMATETHFLIG-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_432]]
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*** [[Tiso_gene_7582]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[GLYOHMETRANS-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_16153]]
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*** [[Tiso_gene_7776]]
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*** [[Tiso_gene_18652]]
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*** [[Tiso_gene_16154]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[HOMOCYSMETB12-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1602]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[METHYLENETHFDEHYDROG-NADP-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6004]]
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*** [[Tiso_gene_432]]
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** 3 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-6321]]
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** 1 associated gene(s):
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*** [[Tiso_gene_17287]]
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−
** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[THYMIDYLATESYN-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_7708]]
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*** [[Tiso_gene_18478]]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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−
*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=5-FORMYL-THF-CYCLO-LIGASE-RXN 5-FORMYL-THF-CYCLO-LIGASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GCVMULTI-RXN GCVMULTI-RXN]
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== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3841 PWY-3841]
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{{#set: common name=RME255}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: in pathway=}}
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{{#set: common name=folate transformations II}}
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{{#set: reconstruction category=manual}}
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{{#set: reaction found=9}}
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{{#set: reconstruction source=manual-primary_network}}
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{{#set: total reaction=11}}
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{{#set: completion rate=82.0}}
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Latest revision as of 19:12, 21 March 2018

Reaction RME255

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RME255
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 0.18 dTTP[c] + 0.32 dGTP[c] + 0.32 dCTP[c] + 1.372 ATP[c] + 0.18 dATP[c] + 2.372 H2O[c] => 1.372 phosphate[c] + 1.372 ADP[c] + 2.372 H+[c] + 1.0 diphosphate[c] + 1.0 DNA[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RME255&oldid=40148"