Difference between revisions of "3.1.6.14-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-4...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.6.14-RXN 3.1.6.14-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** n-acetylglucosamine-6...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.6.14-RXN 3.1.6.14-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-tryptophan degradation XI (mammalian, via kynurenine)
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** n-acetylglucosamine-6-sulfatase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.6.14 EC-3.1.6.14]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''9''' reactions found over '''17''' reactions in the full pathway
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* With identifiers:
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* [[1.13.11.6-RXN]]
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** 1 [[Heparan-NAc-Glc-6S]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Heparan-NAc-Glc]][c] '''+''' 1 [[SULFATE]][c] '''+''' 1 [[PROTON]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_10922]]
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** 1 [heparan sulfate]-α-N-acetyl-D-glucosamine 6-O-sulfate[c] '''+''' 1 H2O[c] '''=>''' 1 a [heparan]-N-acetyl-α-D-glucosamine[c] '''+''' 1 sulfate[c] '''+''' 1 H+[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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* [[2.6.1.7-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[Tiso_gene_18170]]
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*** [[Tiso_gene_15680]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[orthology-esiliculosus]]
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== Pathways  ==
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* [[3-HYDROXY-KYNURENINASE-RXN]]
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== Reconstruction information  ==
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** 2 associated gene(s):
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* Category: [[annotation]]
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*** [[Tiso_gene_10685]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10684]]
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*** Tool: [[pathwaytools]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[ARYLFORMAMIDASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_16921]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-creinhardtii]]
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* [[KYNURENINASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_10685]]
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*** [[Tiso_gene_10684]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14398]]
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*** [[Tiso_gene_6196]]
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*** [[Tiso_gene_15790]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PWY-5651]]
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** 0 associated gene:
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* [[PWY-5652]]
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** 0 associated gene:
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* [[RXN-10721]]
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** 1 associated gene(s):
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*** [[Tiso_gene_15680]]
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** 1 reconstruction source(s) associated:
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−
*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10720 RXN-10720]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10722 RXN-10722]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10723 RXN-10723]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-40674}}
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* UNIPROT:
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{{#set: common name=L-tryptophan degradation XI (mammalian, via kynurenine)}}
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** [http://www.uniprot.org/uniprot/P15586 P15586]
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{{#set: reaction found=9}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=17}}
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{{#set: common name=n-acetylglucosamine-6-sulfatase}}
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{{#set: completion rate=53.0}}
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{{#set: ec number=EC-3.1.6.14}}
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{{#set: gene associated=Tiso_gene_18170}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:13, 21 March 2018

Reaction 3.1.6.14-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • n-acetylglucosamine-6-sulfatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 [heparan sulfate]-α-N-acetyl-D-glucosamine 6-O-sulfate[c] + 1 H2O[c] => 1 a [heparan]-N-acetyl-α-D-glucosamine[c] + 1 sulfate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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