Difference between revisions of "RXN-6883"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6883 RXN-6883] == * direction: ** LEFT-TO-RIGHT * common name: ** alternative_oxidase * ec numb...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6883 RXN-6883] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* common name:
 
* common name:
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** lipoate biosynthesis and incorporation I
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** alternative_oxidase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.10.3.11 EC-1.10.3.11]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[RXN0-947]]
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** 2 [[Ubiquinols]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[Ubiquinones]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_4494]]
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** 2 an ubiquinol[c] '''+''' 1 oxygen[c] '''=>''' 2 H2O[c] '''+''' 2 a ubiquinone[c]
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*** [[Tiso_gene_4493]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN0-949]]
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* Gene: [[Tiso_gene_7486]]
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** 2 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_8049]]
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* Gene: [[Tiso_gene_17130]]
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*** [[Tiso_gene_437]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_7953]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_8278]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-501 PWY0-501]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30258 30258]
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{{#set: taxonomic range=TAX-33090}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R09504 R09504]
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{{#set: taxonomic range=TAX-2759}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=lipoate biosynthesis and incorporation I}}
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{{#set: common name=alternative_oxidase}}
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{{#set: reaction found=2}}
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{{#set: ec number=EC-1.10.3.11}}
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{{#set: total reaction=2}}
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{{#set: gene associated=Tiso_gene_7486|Tiso_gene_17130|Tiso_gene_7953|Tiso_gene_8278}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=PWY-4302}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:14, 21 March 2018

Reaction RXN-6883

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • alternative_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4302, aerobic respiration III (alternative oxidase pathway): PWY-4302
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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