Difference between revisions of "P341-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_19780 == * right end position: ** 2019 * transcription direction: ** POSITIVE * left end position: ** 4 * centisome position: ** 0.19598235...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Pathway]]
−
== Gene Tiso_gene_19780 ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY] ==
−
* right end position:
+
* taxonomic range:
−
** 2019
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** glycolysis V (Pyrococcus)
−
* left end position:
+
−
** 4
+
−
* centisome position:
+
−
** 0.19598235   
+
 
* Synonym(s):
 
* Synonym(s):
 +
** archaeal Embden-Meyerhof pathway
 +
** archaeal Embden-Meyerhof-Parnas pathway
 +
** archaeal EMP pathway
  
−
== Reactions associated ==
+
== Reaction(s) found ==
−
* Reaction: [[DIHYDLIPACETRANS-RXN]]
+
'''6''' reactions found over '''9''' reactions in the full pathway
−
** Source: [[orthology-creinhardtii]]
+
* [[2PGADEHYDRAT-RXN]]
−
* Reaction: [[PYRUVDEH-RXN]]
+
** 4 associated gene(s):
−
** Source: [[orthology-athaliana]]
+
*** [[Tiso_gene_8720]]
−
** Source: [[orthology-athaliana]]
+
*** [[Tiso_gene_14718]]
−
** Source: [[orthology-synechocystis]]
+
*** [[Tiso_gene_5619]]
−
** Source: [[orthology-esiliculosus]]
+
*** [[Tiso_gene_13317]]
−
* Reaction: [[RXN0-1133]]
+
** 7 reconstruction source(s) associated:
−
** Source: [[annotation-in-silico_annotation]]
+
*** [[annotation-experimental_annotation]]
−
*** Assignment: automated-name-match
+
*** [[orthology-esiliculosus]]
−
** Source: [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
−
== Pathways associated ==
+
*** [[orthology-athaliana]]
−
* [[PYRUVDEHYD-PWY]]
+
*** [[orthology-synechocystis]]
−
* [[PWY-7218]]
+
*** [[manual-primary_network]]
−
* [[PWY-7384]]
+
*** [[orthology-creinhardtii]]
−
* [[PWY-6886]]
+
* [[3PGAREARR-RXN]]
−
* [[PWY-5537]]
+
** 16 associated gene(s):
−
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
+
*** [[Tiso_gene_15048]]
−
* [[PWY-5482]]
+
*** [[Tiso_gene_7201]]
 +
*** [[Tiso_gene_9922]]
 +
*** [[Tiso_gene_2841]]
 +
*** [[Tiso_gene_14530]]
 +
*** [[Tiso_gene_16754]]
 +
*** [[Tiso_gene_2365]]
 +
*** [[Tiso_gene_16271]]
 +
*** [[Tiso_gene_5468]]
 +
*** [[Tiso_gene_20311]]
 +
*** [[Tiso_gene_14664]]
 +
*** [[Tiso_gene_15391]]
 +
*** [[Tiso_gene_14212]]
 +
*** [[Tiso_gene_10516]]
 +
*** [[Tiso_gene_9923]]
 +
*** [[Tiso_gene_2667]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[F16ALDOLASE-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_12272]]
 +
*** [[Tiso_gene_65]]
 +
*** [[Tiso_gene_9119]]
 +
*** [[Tiso_gene_14568]]
 +
*** [[Tiso_gene_9179]]
 +
*** [[Tiso_gene_9118]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[PEPDEPHOS-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18206]]
 +
*** [[Tiso_gene_14504]]
 +
*** [[Tiso_gene_974]]
 +
*** [[Tiso_gene_14505]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PGLUCISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_19480]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[TRIOSEPISOMERIZATION-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_19961]]
 +
*** [[Tiso_gene_20000]]
 +
*** [[Tiso_gene_19962]]
 +
*** [[Tiso_gene_10646]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.6-RXN 1.2.7.6-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R302-RXN R302-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17001 RXN-17001]
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=2019}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=glycolysis V (Pyrococcus)}}
−
{{#set: left end position=4}}
+
{{#set: common name=archaeal Embden-Meyerhof pathway|archaeal Embden-Meyerhof-Parnas pathway|archaeal EMP pathway}}
−
{{#set: centisome position=0.19598235    }}
+
{{#set: reaction found=6}}
−
{{#set: reaction associated=DIHYDLIPACETRANS-RXN|PYRUVDEH-RXN|RXN0-1133}}
+
{{#set: total reaction=9}}
−
{{#set: pathway associated=PYRUVDEHYD-PWY|PWY-7218|PWY-7384|PWY-6886|PWY-5537|GLYCOLYSIS-TCA-GLYOX-BYPASS|PWY-5482}}
+
{{#set: completion rate=67.0}}

Latest revision as of 19:15, 21 March 2018

Pathway P341-PWY

  • taxonomic range:
  • common name:
    • glycolysis V (Pyrococcus)
  • Synonym(s):
    • archaeal Embden-Meyerhof pathway
    • archaeal Embden-Meyerhof-Parnas pathway
    • archaeal EMP pathway

Reaction(s) found

6 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P341-PWY&oldid=40427"