Difference between revisions of "5.1.1.18-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.1.1.18-RXN 5.1.1.18-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.1.1.18-RXN 5.1.1.18-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** purine nucleobases degradation I (anaerobic)
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** [http://enzyme.expasy.org/EC/5.1.1.18 EC-5.1.1.18]
 
* Synonym(s):
 
* Synonym(s):
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** purine fermentation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''17''' reactions in the full pathway
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* With identifiers:
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* [[GUANINE-DEAMINASE-RXN]]
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** 1 [[SER]][c] '''=>''' 1 [[D-SERINE]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_12280]]
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** 1 L-serine[c] '''=>''' 1 D-serine[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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* Gene: [[Tiso_gene_17207]]
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** 0 associated gene:
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** Source: [[orthology-creinhardtii]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[manual-primary_network]]
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* [[PWY-6455]], vancomycin resistance II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6455 PWY-6455]
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* [[RXN-7682]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** 1 associated gene(s):
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* [[PWY-6196]], D-serine metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6196 PWY-6196]
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*** [[Tiso_gene_11775]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-athaliana]]
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* Category: [[orthology]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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* [[RXN0-901]]
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*** Tool: [[pantograph]]
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** 1 associated gene(s):
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*** [[Tiso_gene_11775]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.2-RXN 1.2.1.2-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.4-RXN 4.3.1.4-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-FORMIMINOTRANSFERASE-RXN GLYCINE-FORMIMINOTRANSFERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R127-RXN R127-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R128-RXN R128-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R13-RXN R13-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R62-RXN R62-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R63-RXN R63-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7566 RXN-7566]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8752 RXN-8752]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8755 RXN-8755]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1239}}
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* RHEA:
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{{#set: common name=purine nucleobases degradation I (anaerobic)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10980 10980]
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{{#set: common name=purine fermentation}}
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* LIGAND-RXN:
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{{#set: reaction found=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00589 R00589]
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{{#set: total reaction=17}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=24.0}}
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{{#set: ec number=EC-5.1.1.18}}
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{{#set: gene associated=Tiso_gene_17207}}
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{{#set: in pathway=PWY-6455|PWY-6196}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:16, 21 March 2018

Reaction 5.1.1.18-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-serine[c] => 1 D-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6455, vancomycin resistance II: PWY-6455
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6196, D-serine metabolism: PWY-6196
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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