Difference between revisions of "Hexanoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] == * direction: ** LEF...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 4-methyl-2-oxopentanoate dehydrogenase (acylating)
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
+
** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[ISOVALERYL-COA]][c]
+
** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-126]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 NAD+[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 isovaleryl-CoA[c]
+
** 1 all-trans-lycopene[c] '''=>''' 1 γ-carotene[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3577]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_1547]]
 +
** [[pantograph]]-[[athaliana]]
 +
* [[Tiso_gene_4457]]
 +
** [[pantograph]]-[[athaliana]]
 +
* [[Tiso_gene_11980]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_6282]]
 +
** [[pantograph]]-[[athaliana]]
 +
* [[Tiso_gene_8263]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
+
* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7591]], okenone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7591 PWY-7591]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* [[orthology]]:
−
** [[pathwaytools]]:
+
** [[pantograph]]:
−
*** [[experimental_annotation]]
+
*** [[creinhardtii]]
−
*** [[in-silico_annotation]]
+
*** [[athaliana]]
 +
*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25177 25177]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32222 32222]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01651 R01651]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05341 R05341]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (acylating)}}
+
{{#set: ec number=EC-5.5.1.19}}
−
{{#set: ec number=EC-1.2.1}}
+
{{#set: gene associated=Tiso_gene_3577|Tiso_gene_1547|Tiso_gene_4457|Tiso_gene_11980|Tiso_gene_6282|Tiso_gene_8263}}
−
{{#set: in pathway=LEU-DEG2-PWY}}
+
{{#set: in pathway=PWY-5943|PWY-7591}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}

Revision as of 16:21, 10 January 2018

Reaction RXN1F-150

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-lycopene[c] => 1 γ-carotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5943, β-carotene biosynthesis: PWY-5943
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7591, okenone biosynthesis: PWY-7591
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




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