Difference between revisions of "CALVIN-PWY"

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(Created page with "Category:Gene == Gene Tiso_gene_18807 == * right end position: ** 2764 * transcription direction: ** POSITIVE * left end position: ** 523 * centisome position: ** 18.79267...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...")
 
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_18807 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] ==
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* right end position:
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* taxonomic range:
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** 2764
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-39119 TAX-39119]
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** POSITIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38254 TAX-38254]
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-29197 TAX-29197]
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** 523
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38410 TAX-38410]
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* centisome position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5747 TAX-5747]
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** 18.79267   
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2864 TAX-2864]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-877183 TAX-877183]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3027 TAX-3027]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2830 TAX-2830]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2833 TAX-2833]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2870 TAX-2870]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2825 TAX-2825]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 +
* common name:
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** Calvin-Benson-Bassham cycle
 
* Synonym(s):
 
* Synonym(s):
 +
** photosynthetic dark reactions
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** photosynthetic CO2 fixation
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** reductive pentose phosphate pathway
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** Calvin cycle
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** carbon fixation
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** Calvin-Benson cycle
  
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== Reactions associated ==
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== Reaction(s) found ==
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* Reaction: [[3.2.1.18-RXN]]
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'''13''' reactions found over '''13''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[1.2.1.13-RXN]]
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*** Assignment: ec-number
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** 4 associated gene(s):
−
== Pathways associated ==
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*** [[Tiso_gene_6766]]
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*** [[Tiso_gene_6765]]
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*** [[Tiso_gene_20000]]
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*** [[Tiso_gene_10646]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[1TRANSKETO-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_11559]]
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*** [[Tiso_gene_5008]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[2TRANSKETO-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_11559]]
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*** [[Tiso_gene_5008]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[F16ALDOLASE-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_12272]]
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*** [[Tiso_gene_65]]
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*** [[Tiso_gene_9119]]
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*** [[Tiso_gene_14568]]
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*** [[Tiso_gene_9179]]
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*** [[Tiso_gene_9118]]
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** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[F16BDEPHOS-RXN]]
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** 7 associated gene(s):
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*** [[Tiso_gene_15398]]
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*** [[Tiso_gene_9435]]
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*** [[Tiso_gene_16502]]
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*** [[Tiso_gene_4905]]
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*** [[Tiso_gene_8226]]
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*** [[Tiso_gene_4904]]
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*** [[Tiso_gene_3483]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_3526]]
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*** [[Tiso_gene_18264]]
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*** [[Tiso_gene_3527]]
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*** [[Tiso_gene_18263]]
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*** [[Tiso_gene_12104]]
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*** [[Tiso_gene_14642]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PHOSPHORIBULOKINASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_17637]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RIB5PISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18217]]
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** 5 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_12199]]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[RIBULP3EPIM-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_19140]]
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*** [[Tiso_gene_4754]]
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*** [[Tiso_gene_10879]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[SEDOBISALDOL-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_14568]]
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*** [[Tiso_gene_9179]]
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*** [[Tiso_gene_65]]
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*** [[Tiso_gene_12272]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_8226]]
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*** [[Tiso_gene_4905]]
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*** [[Tiso_gene_16502]]
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*** [[Tiso_gene_9435]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_19961]]
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*** [[Tiso_gene_20000]]
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*** [[Tiso_gene_19962]]
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*** [[Tiso_gene_10646]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=2764}}
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* PLANTCYC : CALVIN-PWY
−
{{#set: transcription direction=POSITIVE}}
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* ARACYC:
−
{{#set: left end position=523}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
−
{{#set: centisome position=18.79267    }}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: reaction associated=3.2.1.18-RXN}}
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{{#set: taxonomic range=TAX-39119}}
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{{#set: taxonomic range=TAX-38254}}
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{{#set: taxonomic range=TAX-29197}}
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{{#set: taxonomic range=TAX-38410}}
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{{#set: taxonomic range=TAX-5747}}
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{{#set: taxonomic range=TAX-2864}}
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{{#set: taxonomic range=TAX-877183}}
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{{#set: taxonomic range=TAX-2836}}
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{{#set: taxonomic range=TAX-3027}}
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{{#set: taxonomic range=TAX-2830}}
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{{#set: taxonomic range=TAX-2833}}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: taxonomic range=TAX-33682}}
 +
{{#set: taxonomic range=TAX-2763}}
 +
{{#set: taxonomic range=TAX-2870}}
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{{#set: taxonomic range=TAX-2825}}
 +
{{#set: taxonomic range=TAX-2}}
 +
{{#set: taxonomic range=TAX-33090}}
 +
{{#set: common name=Calvin-Benson-Bassham cycle}}
 +
{{#set: common name=photosynthetic dark reactions|photosynthetic CO2 fixation|reductive pentose phosphate pathway|Calvin cycle|carbon fixation|Calvin-Benson cycle}}
 +
{{#set: reaction found=13}}
 +
{{#set: total reaction=13}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 19:17, 21 March 2018

Pathway CALVIN-PWY

Reaction(s) found

13 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links













Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CALVIN-PWY&oldid=40610"