Difference between revisions of "GLYCOPHOSPHORYL-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6342 PWY-6342] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-77...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOPHOSPHORYL-RXN GLYCOPHOSPHORYL-RXN] == * direction: ** REVERSIBLE * common name: ** thymidine_...")
 
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6342 PWY-6342] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOPHOSPHORYL-RXN GLYCOPHOSPHORYL-RXN] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
+
** REVERSIBLE
 
* common name:
 
* common name:
** noradrenaline and adrenaline degradation
+
** thymidine_phosphorylase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
** norepinephrine and epinephrine degradation
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''2''' reactions found over '''13''' reactions in the full pathway
+
* With identifiers:
* [[RXN-10911]]
+
** 1 [[Pi]][c] '''+''' 1 [[Glycogens]][c] '''<=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[CPD0-971]][c]
** 6 associated gene(s):
+
* With common name(s):
*** [[Tiso_gene_6562]]
+
** 1 phosphate[c] '''+''' 1 a glycogen[c] '''<=>''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 an &alpha;-limit dextrin[c]
*** [[Tiso_gene_7649]]
+
 
*** [[Tiso_gene_6563]]
+
== Genes associated with this reaction  ==
*** [[Tiso_gene_18459]]
+
Genes have been associated with this reaction based on different elements listed below.
*** [[Tiso_gene_5425]]
+
* Gene: [[Tiso_gene_1011]]
*** [[Tiso_gene_5424]]
+
** Source: [[annotation-in-silico_annotation]]
** 3 reconstruction source(s) associated:
+
*** Assignment: EC-NUMBER
*** [[orthology-athaliana]]
+
== Pathways  ==
*** [[annotation-in-silico_annotation]]
+
* [[PWY-5941]], glycogen degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941]
*** [[orthology-esiliculosus]]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
* [[RXN-10915]]
+
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
** 5 associated gene(s):
+
** '''6''' reactions found over '''8''' reactions in the full pathway
*** [[Tiso_gene_7649]]
+
== Reconstruction information  ==
*** [[Tiso_gene_5424]]
+
* Category: [[annotation]]
*** [[Tiso_gene_6563]]
+
** Source: [[annotation-in-silico_annotation]]
*** [[Tiso_gene_6562]]
+
*** Tool: [[pathwaytools]]
*** [[Tiso_gene_5425]]
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
== Reaction(s) not found ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10906 RXN-10906]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10907 RXN-10907]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10908 RXN-10908]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10909 RXN-10909]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10910 RXN-10910]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10912 RXN-10912]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10913 RXN-10913]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10914 RXN-10914]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10916 RXN-10916]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10917 RXN-10917]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-241 RXN66-241]
+
 
== External links  ==
 
== External links  ==
* LIGAND-MAP:
+
{{#set: direction=REVERSIBLE}}
** [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350]
+
{{#set: common name=thymidine_phosphorylase}}
{{#set: taxonomic range=TAX-7742}}
+
{{#set: ec number=EC-2.4.1.1}}
{{#set: common name=noradrenaline and adrenaline degradation}}
+
{{#set: gene associated=Tiso_gene_1011}}
{{#set: common name=norepinephrine and epinephrine degradation}}
+
{{#set: in pathway=PWY-5941|GLYCOCAT-PWY}}
{{#set: reaction found=2}}
+
{{#set: reconstruction category=annotation}}
{{#set: total reaction=13}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: completion rate=15.0}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:18, 21 March 2018

Reaction GLYCOPHOSPHORYL-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phosphate[c] + 1 a glycogen[c] <=> 1 α-D-glucopyranose 1-phosphate[c] + 1 an α-limit dextrin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5941, glycogen degradation II: PWY-5941
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links