Difference between revisions of "RXN-9624"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME144 RME144] == * direction: ** LEFT-TO-RIGHT * common name: ** RME144 * Synonym(s): == Reaction...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME144 RME144] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** RME144
+
** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 0.056 [[PRO]][c] '''+''' 0.024 [[MET]][c] '''+''' 0.009 [[4-HYDROXY-L-PROLINE]][c] '''+''' 0.03 [[TYR]][c] '''+''' 0.092 [[GLY]][c] '''+''' 0.052 [[GLN]][c] '''+''' 0.041 [[PHE]][c] '''+''' 0.052 [[GLT]][c] '''+''' 0.017 [[HIS]][c] '''+''' 0.012 [[CYS]][c] '''+''' 4.306 [[ATP]][c] '''+''' 0.047 [[ASN]][c] '''+''' 0.06 [[LYS]][c] '''+''' 3.306 [[WATER]][c] '''+''' 0.061 [[VAL]][c] '''+''' 0.037 [[ILE]][c] '''+''' 0.001 [[TRP]][c] '''+''' 0.111 [[L-ALPHA-ALANINE]][c] '''+''' 0.09 [[LEU]][c] '''+''' 0.054 [[SER]][c] '''+''' 0.047 [[L-ASPARTATE]][c] '''+''' 0.052 [[ARG]][c] '''+''' 0.056 [[THR]][c] '''=>''' 4.306 [[ADP]][c] '''+''' 1.0 [[General-Protein-Substrates]][c] '''+''' 4.319 [[PROTON]][c] '''+''' 4.306 [[Pi]][c]
+
** 1 [[STEAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[STEARIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 0.056 L-proline[c] '''+''' 0.024 L-methionine[c] '''+''' 0.009 trans-4-hydroxy-L-proline[c] '''+''' 0.03 L-tyrosine[c] '''+''' 0.092 glycine[c] '''+''' 0.052 L-glutamine[c] '''+''' 0.041 L-phenylalanine[c] '''+''' 0.052 L-glutamate[c] '''+''' 0.017 L-histidine[c] '''+''' 0.012 L-cysteine[c] '''+''' 4.306 ATP[c] '''+''' 0.047 L-asparagine[c] '''+''' 0.06 L-lysine[c] '''+''' 3.306 H2O[c] '''+''' 0.061 L-valine[c] '''+''' 0.037 L-isoleucine[c] '''+''' 0.001 L-tryptophan[c] '''+''' 0.111 L-alanine[c] '''+''' 0.09 L-leucine[c] '''+''' 0.054 L-serine[c] '''+''' 0.047 L-aspartate[c] '''+''' 0.052 L-arginine[c] '''+''' 0.056 L-threonine[c] '''=>''' 4.306 ADP[c] '''+''' 1.0 a protein[c] '''+''' 4.319 H+[c] '''+''' 4.306 phosphate[c]
+
** 1 stearoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 stearate[c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_7477]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_801]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
+
* Category: [[orthology]]
−
** Source: [[manual-primary_network]]
+
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30139 30139]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08174 R08174]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=RME144}}
+
{{#set: ec number=EC-3.1.2.2}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_7477|Tiso_gene_801}}
−
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=PWY-5972|PWY-6733|PWY3O-355}}
−
{{#set: reconstruction source=manual-primary_network}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:18, 21 March 2018

Reaction RXN-9624

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5972, stearate biosynthesis I (animals and fungi): PWY-5972
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 8 reactions found over 18 reactions in the full pathway
  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9624&oldid=40768"