Difference between revisions of "RXN1F-151"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=DARABITOLUTIL-PWY DARABITOLUTIL-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=DARABITOLUTIL-PWY DARABITOLUTIL-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** D-arabitol degradation
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** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
 
* Synonym(s):
 
* Synonym(s):
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** D-arabitol utilization
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[XYLULOKIN-RXN]]
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** 1 [[CPD1F-126]][c] '''=>''' 1 [[CPD1F-129]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_15823]]
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** 1 γ-carotene[c] '''=>''' 1 all-trans-β-carotene[c]
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*** [[Tiso_gene_15822]]
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*** [[Tiso_gene_14270]]
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== Genes associated with this reaction  ==
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** 3 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_4457]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_1547]]
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== Reaction(s) not found ==
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** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=D-ARABINITOL-4-DEHYDROGENASE-RXN D-ARABINITOL-4-DEHYDROGENASE-RXN]
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* Gene: [[Tiso_gene_3577]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_11980]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_6282]]
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_8263]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1224}}
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* RHEA:
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{{#set: common name=D-arabitol degradation}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32242 32242]
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{{#set: common name=D-arabitol utilization}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03824 R03824]
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{{#set: total reaction=2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=50.0}}
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{{#set: ec number=EC-5.5.1.19}}
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{{#set: gene associated=Tiso_gene_4457|Tiso_gene_1547|Tiso_gene_3577|Tiso_gene_11980|Tiso_gene_6282|Tiso_gene_8263}}
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{{#set: in pathway=PWY-5943}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:19, 21 March 2018

Reaction RXN1F-151

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 γ-carotene[c] => 1 all-trans-β-carotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5943, β-carotene biosynthesis: PWY-5943
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1F-151&oldid=40858"