Difference between revisions of "S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE] == * smiles: **...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C[S+](CCC(C([O-])=O)=O)CC1(OC(C(C1O)O)N3(C2(=NC=NC(=C2N=C3)N)))
 
* common name:
 
* common name:
−
** retinyl-palmitate esterase
+
** S-adenosyl-4-methylthio-2-oxobutanoate
−
** ORF
+
* inchi key:
−
** serine_esterase
+
** InChIKey=UOKVQQMBGVMXPU-CJPDYEHRSA-N
−
** sialate_o-acetylesterase-like_protein
+
* molecular weight:
−
** lysophospholipase
+
** 397.405   
−
** alpha_beta_hydrolase
+
−
** alpha_beta_hydrolase_fold_protein
+
−
** protein_chloroplastic
+
−
** para-nitrobenzyl_esterase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
−
** retinyl palmitate hydrolase
 
−
** retinyl palmitate hydrolyase
 
−
** retinyl ester hydrolase
 
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[CHOCOLA_A]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Retinols]][c]
+
== Reaction(s) of unknown directionality ==
−
* With common name(s):
+
* [[DAPASYN-RXN]]
−
** 1 all-trans-retinyl palmitate[c] '''+''' 1 H2O[c] '''=>''' 1 palmitate[c] '''+''' 1 H+[c] '''+''' 1 a retinol[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_4650]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_10066]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_4606]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_1538]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_19778]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_11351]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Tiso_gene_1922]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_9429]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_2556]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_12686]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_16518]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_1537]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_17029]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21508 21508]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5459852 5459852]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CHEMSPIDER:
−
{{#set: common name=retinyl-palmitate esterase}}
+
** [http://www.chemspider.com/Chemical-Structure.4573603.html 4573603]
−
{{#set: common name=ORF}}
+
* CHEBI:
−
{{#set: common name=serine_esterase}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16490 16490]
−
{{#set: common name=sialate_o-acetylesterase-like_protein}}
+
* BIGG : amob
−
{{#set: common name=lysophospholipase}}
+
* LIGAND-CPD:
−
{{#set: common name=alpha_beta_hydrolase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C04425 C04425]
−
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
+
{{#set: smiles=C[S+](CCC(C([O-])=O)=O)CC1(OC(C(C1O)O)N3(C2(=NC=NC(=C2N=C3)N)))}}
−
{{#set: common name=protein_chloroplastic}}
+
{{#set: common name=S-adenosyl-4-methylthio-2-oxobutanoate}}
−
{{#set: common name=para-nitrobenzyl_esterase}}
+
{{#set: inchi key=InChIKey=UOKVQQMBGVMXPU-CJPDYEHRSA-N}}
−
{{#set: ec number=EC-3.1.1.1}}
+
{{#set: molecular weight=397.405    }}
−
{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
+
{{#set: reversible reaction associated=DAPASYN-RXN}}
−
{{#set: gene associated=Tiso_gene_4650|Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_1538|Tiso_gene_19778|Tiso_gene_11351|Tiso_gene_1922|Tiso_gene_9429|Tiso_gene_2556|Tiso_gene_12686|Tiso_gene_16518|Tiso_gene_1537|Tiso_gene_17029}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:20, 21 March 2018

Metabolite S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE

  • smiles:
    • C[S+](CCC(C([O-])=O)=O)CC1(OC(C(C1O)O)N3(C2(=NC=NC(=C2N=C3)N)))
  • common name:
    • S-adenosyl-4-methylthio-2-oxobutanoate
  • inchi key:
    • InChIKey=UOKVQQMBGVMXPU-CJPDYEHRSA-N
  • molecular weight:
    • 397.405
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C[S+](CCC(C([O-])=O)=O)CC1(OC(C(C1O)O)N3(C2(=NC=NC(=C2N=C3)N)))" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE&oldid=40933"