Difference between revisions of "NAD-BIOSYNTHESIS-III"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** phosp...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-III NAD-BIOSYNTHESIS-III] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAG...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-III NAD-BIOSYNTHESIS-III] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** ORF
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** NAD biosynthesis III
** phosphoserine_aminotransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
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* Synonym(s):
 
* Synonym(s):
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** nicotinamide adenine dinucleotide biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[GLT]][c] '''+''' 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''<=>''' 1 [[4-PHOSPHONOOXY-THREONINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
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* [[2.4.2.12-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 L-glutamate[c] '''+''' 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] '''<=>''' 1 4-phospho-hydroxy-L-threonine[c] '''+''' 1 2-oxoglutarate[c]
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*** [[Tiso_gene_8411]]
 
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*** [[Tiso_gene_8186]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_8410]]
Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
* Gene: [[Tiso_gene_17123]]
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*** [[annotation-in-silico_annotation]]
** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
*** Assignment: EC-NUMBER
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== Reaction(s) not found ==
** Source: [[annotation-experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.1-RXN 2.7.7.1-RXN]
*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_15686]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16573 16573]
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{{#set: common name=NAD biosynthesis III}}
* LIGAND-RXN:
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{{#set: common name=nicotinamide adenine dinucleotide biosynthesis}}
** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
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{{#set: reaction found=1}}
{{#set: direction=REVERSIBLE}}
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{{#set: total reaction=2}}
{{#set: common name=ORF}}
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{{#set: completion rate=50.0}}
{{#set: common name=phosphoserine_aminotransferase}}
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{{#set: ec number=EC-2.6.1.52}}
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{{#set: gene associated=Tiso_gene_17123|Tiso_gene_15686}}
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{{#set: in pathway=PYRIDOXSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:20, 21 March 2018

Pathway NAD-BIOSYNTHESIS-III

  • taxonomic range:
  • common name:
    • NAD biosynthesis III
  • Synonym(s):
    • nicotinamide adenine dinucleotide biosynthesis

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links