Difference between revisions of "RXN-7660"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_10077 == * right end position: ** 13024 * transcription direction: ** NEGATIVE * left end position: ** 11427 * centisome position: ** 74.57...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == * direction: ** REVERSIBLE * common name: ** geranylgeranyl_diphosphate_reduc...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == |
| − | * | + | * direction: |
| − | + | ** REVERSIBLE | |
| − | + | * common name: | |
| − | ** | + | ** geranylgeranyl_diphosphate_reductase |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | * | + | ** 1 [[NADP]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''<=>''' 1 [[CPD-7003]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] |
| − | * | + | * With common name(s): |
| + | ** 1 NADP+[c] '''+''' 1 phytyl diphosphate[c] '''<=>''' 1 tetrahydrogeranylgeranyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_2613]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: AUTOMATED-NAME-MATCH |
** Source: [[annotation-experimental_annotation]] | ** Source: [[annotation-experimental_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * | + | == Pathways == |
| − | * | + | * [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063] |
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
** Source: [[annotation-experimental_annotation]] | ** Source: [[annotation-experimental_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
| − | + | ||
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756] |
| − | {{#set: | + | {{#set: direction=REVERSIBLE}} |
| − | {{#set: | + | {{#set: common name=geranylgeranyl_diphosphate_reductase}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_2613}} |
| − | {{#set: | + | {{#set: in pathway=PWY-5063}} |
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:21, 21 March 2018
Contents
Reaction RXN-7660
- direction:
- REVERSIBLE
- common name:
- geranylgeranyl_diphosphate_reductase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 NADP[c] + 1 PHYTYL-PYROPHOSPHATE[c] <=> 1 CPD-7003[c] + 1 PROTON[c] + 1 NADPH[c]
- With common name(s):
- 1 NADP+[c] + 1 phytyl diphosphate[c] <=> 1 tetrahydrogeranylgeranyl diphosphate[c] + 1 H+[c] + 1 NADPH[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2613
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
