Difference between revisions of "RXN-1143"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_14848 == * right end position: ** 3801 * transcription direction: ** POSITIVE * left end position: ** 63 * centisome position: ** 1.1683977...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** caffeate_o-methyltransferase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68] |
| − | * | + | |
| − | ** 1. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | ** Source: [[annotation- | + | ** 1 [[5-HYDROXY-CONIFERALDEHYDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[SINAPALDEHYDE]][c] |
| − | *** Assignment: | + | * With common name(s): |
| − | ** | + | ** 1 5-hydroxy-coniferaldehyde[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 sinapaldehyde[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_18257]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_18971]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] | ||
| + | ** '''7''' reactions found over '''15''' reactions in the full pathway | ||
| + | * [[PWY-5168]], ferulate and sinapate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5168 PWY-5168] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
| − | ** | + | *** Tool: [[pantograph]] |
| − | + | * Category: [[annotation]] | |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06576 R06576] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=caffeate_o-methyltransferase}} |
| − | {{#set: | + | {{#set: ec number=EC-2.1.1.68}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}} |
| + | {{#set: in pathway=PWY-361|PWY-5168}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:21, 21 March 2018
Contents
Reaction RXN-1143
- direction:
- LEFT-TO-RIGHT
- common name:
- caffeate_o-methyltransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 5-HYDROXY-CONIFERALDEHYDE[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 PROTON[c] + 1 ADENOSYL-HOMO-CYS[c] + 1 SINAPALDEHYDE[c]
- With common name(s):
- 1 5-hydroxy-coniferaldehyde[c] + 1 S-adenosyl-L-methionine[c] => 1 H+[c] + 1 S-adenosyl-L-homocysteine[c] + 1 sinapaldehyde[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_18257
- Source: orthology-esiliculosus
- Gene: Tiso_gene_18971
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-361, phenylpropanoid biosynthesis: PWY-361
- 7 reactions found over 15 reactions in the full pathway
- PWY-5168, ferulate and sinapate biosynthesis: PWY-5168
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
