Difference between revisions of "35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5116 RXN0-5116] == * direction: ** LEFT-TO-RIGHT * common name: ** ribulokinase * ec number: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] == * direction: ** LEFT-TO...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5116 RXN0-5116] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** ribulokinase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.16 EC-2.7.1.16]
+
** [http://enzyme.expasy.org/EC/3.1.4.35 EC-3.1.4.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-RIBULOSE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-RIBULOSE-5-P]][c]
+
** 1 [[CGMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-ribulose[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 L-ribulose 5-phosphate[c]
+
** 1 cyclic-GMP[c] '''+''' 1 H2O[c] '''=>''' 1 GMP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_16670]]
+
* Gene: [[Tiso_gene_9644]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-creinhardtii]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_13785]]
 +
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_12792]]
 +
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[ARABCAT-PWY]], L-arabinose degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ARABCAT-PWY ARABCAT-PWY]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-creinhardtii]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22072 22072]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16957 16957]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02439 R02439]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01234 R01234]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P04972 P04972]
 +
** [http://www.uniprot.org/uniprot/P16586 P16586]
 +
** [http://www.uniprot.org/uniprot/P23439 P23439]
 +
** [http://www.uniprot.org/uniprot/P35913 P35913]
 +
** [http://www.uniprot.org/uniprot/P33726 P33726]
 +
** [http://www.uniprot.org/uniprot/P09174 P09174]
 +
** [http://www.uniprot.org/uniprot/P52731 P52731]
 +
** [http://www.uniprot.org/uniprot/P51160 P51160]
 +
** [http://www.uniprot.org/uniprot/P18545 P18545]
 +
** [http://www.uniprot.org/uniprot/O76074 O76074]
 +
** [http://www.uniprot.org/uniprot/P11541 P11541]
 +
** [http://www.uniprot.org/uniprot/P27664 P27664]
 +
** [http://www.uniprot.org/uniprot/Q62037 Q62037]
 +
** [http://www.uniprot.org/uniprot/P23440 P23440]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ribulokinase}}
+
{{#set: ec number=EC-3.1.4.35}}
−
{{#set: ec number=EC-2.7.1.16}}
+
{{#set: gene associated=Tiso_gene_9644|Tiso_gene_13785|Tiso_gene_12792}}
−
{{#set: gene associated=Tiso_gene_16670}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=ARABCAT-PWY}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:21, 21 March 2018

Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 cyclic-GMP[c] + 1 H2O[c] => 1 GMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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