Difference between revisions of "CPD-18493"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18493 CPD-18493] == * smiles: ** CCCCCC=CCC=CCC=CCC=CCC=CCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18493 CPD-18493] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCC=CCC=CCC=CCC=CCC=CCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
 
* common name:
 
* common name:
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** assimilatory_nitrate_reductase
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** (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA
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** ORF
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* inchi key:
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* ec number:
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** InChIKey=NNEPPYNERZEJEE-VUGYPBMHSA-J
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** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
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* molecular weight:
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** 1120.05   
 
* Synonym(s):
 
* Synonym(s):
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** (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosa-6,9,12,15,18-pentaenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-17115]]
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** 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NITRATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[NAD]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 nitrate[c] '''=>''' 1 H2O[c] '''+''' 1 nitrite[c] '''+''' 1 NAD+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_16889]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_18918]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72193738 72193738]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76366 76366]
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* UNIPROT:
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{{#set: smiles=CCCCCC=CCC=CCC=CCC=CCC=CCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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** [http://www.uniprot.org/uniprot/Q39607 Q39607]
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{{#set: common name=(3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q41201 Q41201]
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{{#set: inchi key=InChIKey=NNEPPYNERZEJEE-VUGYPBMHSA-J}}
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** [http://www.uniprot.org/uniprot/P17569 P17569]
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{{#set: molecular weight=1120.05    }}
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** [http://www.uniprot.org/uniprot/P54233 P54233]
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{{#set: common name=(3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosa-6,9,12,15,18-pentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P36841 P36841]
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{{#set: consumed by=RXN-17115}}
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** [http://www.uniprot.org/uniprot/P27967 P27967]
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** [http://www.uniprot.org/uniprot/P27969 P27969]
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** [http://www.uniprot.org/uniprot/P11035 P11035]
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** [http://www.uniprot.org/uniprot/P08509 P08509]
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** [http://www.uniprot.org/uniprot/P11605 P11605]
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** [http://www.uniprot.org/uniprot/P23312 P23312]
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** [http://www.uniprot.org/uniprot/P17570 P17570]
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** [http://www.uniprot.org/uniprot/P16081 P16081]
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** [http://www.uniprot.org/uniprot/Q01170 Q01170]
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** [http://www.uniprot.org/uniprot/P39865 P39865]
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** [http://www.uniprot.org/uniprot/P11832 P11832]
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** [http://www.uniprot.org/uniprot/P39869 P39869]
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** [http://www.uniprot.org/uniprot/Q43265 Q43265]
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** [http://www.uniprot.org/uniprot/P43101 P43101]
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** [http://www.uniprot.org/uniprot/P43100 P43100]
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** [http://www.uniprot.org/uniprot/Q42497 Q42497]
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** [http://www.uniprot.org/uniprot/P39866 P39866]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=assimilatory_nitrate_reductase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.7.1.1}}
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{{#set: gene associated=Tiso_gene_16889|Tiso_gene_18918}}
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{{#set: in pathway=PWY-381}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:23, 21 March 2018

Metabolite CPD-18493

  • smiles:
    • CCCCCC=CCC=CCC=CCC=CCC=CCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
  • common name:
    • (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA
  • inchi key:
    • InChIKey=NNEPPYNERZEJEE-VUGYPBMHSA-J
  • molecular weight:
    • 1120.05
  • Synonym(s):
    • (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosa-6,9,12,15,18-pentaenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCC=CCC=CCC=CCC=CCC=CCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O" cannot be used as a page name in this wiki.



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