Difference between revisions of "RXN-14227"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_4460 == * Synonym(s): == Reactions associated == * Reaction: RXN-15556 ** Source: annotation-in-silico_annotation *** Assignment:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14227 RXN-14227] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_deoxy_cytosolic_type_c_pr...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_4460 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14227 RXN-14227] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** 5_deoxy_cytosolic_type_c_protein
 +
** 5_-nucleotidase
 +
** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[RXN-15556]]
+
* With identifiers:
 +
** 1 [[WATER]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD-8259]][c]
 +
* With common name(s):
 +
** 1 H2O[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''=>''' 1 phosphate[c] '''+''' 1 β-D-ribosylnicotinate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6640]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5911]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_14434]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6988]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14246]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14435]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13929]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: EC-NUMBER
−
* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
−
* [[PWY-7511]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
+
* RHEA:
−
{{#set: pathway associated=PWY-7511}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30938 30938]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03346 R03346]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
 +
{{#set: common name=5_-nucleotidase}}
 +
{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-3.1.3.5}}
 +
{{#set: gene associated=Tiso_gene_6640|Tiso_gene_5911|Tiso_gene_14434|Tiso_gene_6988|Tiso_gene_14246|Tiso_gene_14435|Tiso_gene_13929}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:23, 21 March 2018

Reaction RXN-14227

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5_deoxy_cytosolic_type_c_protein
    • 5_-nucleotidase
    • probable_cytosolic_imp-gmp_specific_5_-nucleotidase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 β-nicotinate D-ribonucleotide[c] => 1 phosphate[c] + 1 β-D-ribosylnicotinate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14227&oldid=41273"