Difference between revisions of "PEPCARBOXYKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHHB-METHYLTRANSFER-RXN DHHB-METHYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoenol...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHHB-METHYLTRANSFER-RXN DHHB-METHYLTRANSFER-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-demethylubiquinone-9_3-methyltransferase
+
** Phosphoenolpyruvate carboxykinase [ATP]
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.64 EC-2.1.1.64]
+
** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
 
* Synonym(s):
 
* Synonym(s):
−
** 5-demethylubiquinone-8 methyltransferase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-9956]][c]
+
** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-demethylubiquinol-8[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 ubiquinol-8[c]
+
** 1 oxaloacetate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_6943]]
+
* Gene: [[Tiso_gene_19475]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[annotation-experimental_annotation]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
+
* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
+
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28679 28679]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P17993 P17993]
+
** [http://www.uniprot.org/uniprot/P10963 P10963]
−
** [http://www.uniprot.org/uniprot/Q9JWE6 Q9JWE6]
+
** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
−
** [http://www.uniprot.org/uniprot/Q9ZCT9 Q9ZCT9]
+
** [http://www.uniprot.org/uniprot/P43923 P43923]
−
** [http://www.uniprot.org/uniprot/P37431 P37431]
+
** [http://www.uniprot.org/uniprot/P22259 P22259]
 +
** [http://www.uniprot.org/uniprot/P42066 P42066]
 +
** [http://www.uniprot.org/uniprot/P49292 P49292]
 +
** [http://www.uniprot.org/uniprot/O49547 O49547]
 +
** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
 +
** [http://www.uniprot.org/uniprot/Q39294 Q39294]
 +
** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-demethylubiquinone-9_3-methyltransferase}}
+
{{#set: common name=Phosphoenolpyruvate carboxykinase [ATP]}}
−
{{#set: ec number=EC-2.1.1.64}}
+
{{#set: ec number=EC-4.1.1.49}}
−
{{#set: common name=5-demethylubiquinone-8 methyltransferase}}
+
{{#set: gene associated=Tiso_gene_19475}}
−
{{#set: gene associated=Tiso_gene_6943}}
+
{{#set: in pathway=PWY-561|GLUCONEO-PWY|PWY-7117}}
−
{{#set: in pathway=PWY-6708|PWY-5870}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|orthology-creinhardtii|orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:24, 21 March 2018

Reaction PEPCARBOXYKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoenolpyruvate carboxykinase [ATP]
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-561, superpathway of glyoxylate cycle and fatty acid degradation: PWY-561
    • 5 reactions found over 8 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

"Phosphoenolpyruvate carboxykinase [ATP" cannot be used as a page name in this wiki.




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