Difference between revisions of "PWY-1722"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] == * direction: ** LEFT-TO-RIGHT * common name: ** purple_acid_phosphatase-like_...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** purple_acid_phosphatase-like_protein
+
** formate assimilation into 5,10-methylenetetrahydrofolate
** alkaline_phosphatase_d
+
** acid_phosphatase
+
** ORF
+
** alkaline_phosphatase
+
** histidine_acid_phosphatase_domain_containing_2a
+
* ec number:
+
** [http://enzyme.expasy.org/EC/3.1.3.2 EC-3.1.3.2]
+
** [http://enzyme.expasy.org/EC/3.1.3.1 EC-3.1.3.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''3''' reactions found over '''3''' reactions in the full pathway
** 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[NAD]][c]
+
* [[FORMATETHFLIG-RXN]]
* With common name(s):
+
** 2 associated gene(s):
** 1 NADP+[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 NAD+[c]
+
*** [[Tiso_gene_432]]
 
+
*** [[Tiso_gene_7582]]
== Genes associated with this reaction  ==
+
** 4 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-experimental_annotation]]
* Gene: [[Tiso_gene_9372]]
+
*** [[manual-primary_network]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[annotation-in-silico_annotation]]
*** Assignment: EC-NUMBER
+
*** [[orthology-esiliculosus]]
* Gene: [[Tiso_gene_17309]]
+
* [[METHENYLTHFCYCLOHYDRO-RXN]]
** Source: [[annotation-in-silico_annotation]]
+
** 0 associated gene:
*** Assignment: EC-NUMBER
+
** 1 reconstruction source(s) associated:
* Gene: [[Tiso_gene_15256]]
+
*** [[manual-primary_network]]
** Source: [[annotation-in-silico_annotation]]
+
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
*** Assignment: EC-NUMBER
+
** 2 associated gene(s):
* Gene: [[Tiso_gene_3271]]
+
*** [[Tiso_gene_6004]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[Tiso_gene_432]]
*** Assignment: EC-NUMBER
+
** 3 reconstruction source(s) associated:
* Gene: [[Tiso_gene_8159]]
+
*** [[manual-primary_network]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[annotation-in-silico_annotation]]
*** Assignment: EC-NUMBER
+
*** [[orthology-esiliculosus]]
* Gene: [[Tiso_gene_10738]]
+
== Reaction(s) not found ==
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_5996]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_17310]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
== Pathways  ==
+
* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[NADPHOS-DEPHOS-PWY]], NAD phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=NADPHOS-DEPHOS-PWY NADPHOS-DEPHOS-PWY]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28050 28050]
+
{{#set: taxonomic range=TAX-2157}}
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2}}
** [http://www.genome.jp/dbget-bin/www_bget?R00118 R00118]
+
{{#set: common name=formate assimilation into 5,10-methylenetetrahydrofolate}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction found=3}}
{{#set: common name=purple_acid_phosphatase-like_protein}}
+
{{#set: total reaction=3}}
{{#set: common name=alkaline_phosphatase_d}}
+
{{#set: completion rate=100.0}}
{{#set: common name=acid_phosphatase}}
+
{{#set: common name=ORF}}
+
{{#set: common name=alkaline_phosphatase}}
+
{{#set: common name=histidine_acid_phosphatase_domain_containing_2a}}
+
{{#set: ec number=EC-3.1.3.2}}
+
{{#set: ec number=EC-3.1.3.1}}
+
{{#set: gene associated=Tiso_gene_9372|Tiso_gene_17309|Tiso_gene_15256|Tiso_gene_3271|Tiso_gene_8159|Tiso_gene_10738|Tiso_gene_5996|Tiso_gene_17310}}
+
{{#set: in pathway=PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:25, 21 March 2018

Pathway PWY-1722

  • taxonomic range:
  • common name:
    • formate assimilation into 5,10-methylenetetrahydrofolate
  • Synonym(s):

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links