Difference between revisions of "CPD-12904"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S2O3 S2O3] == * smiles: ** O=S(=O)([O-])S * inchi key: ** InChIKey=DHCDFWKWKRSZHF-UHFFFAOYSA-M...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16649 RXN-16649] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec number:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S2O3 S2O3] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16649 RXN-16649] ==
* smiles:
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* direction:
** O=S(=O)([O-])S
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** LEFT-TO-RIGHT
* inchi key:
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** InChIKey=DHCDFWKWKRSZHF-UHFFFAOYSA-M
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* common name:
 
* common name:
** thiosulfate
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** beta-lactamase
* molecular weight:
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* ec number:
** 113.126   
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** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
 
* Synonym(s):
 
* Synonym(s):
** S2O3
 
** S2O32-
 
** S2O3-2
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[THIOSULFATE-SULFURTRANSFERASE-RXN]]
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* With identifiers:
== Reaction(s) known to produce the compound ==
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** 1 [[CPD-17927]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-ALANINE]][c] '''+''' 1 [[CPD-17926]][c]
== Reaction(s) of unknown directionality ==
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* With common name(s):
* [[RXN0-6385]]
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** 1 a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide[c] '''+''' 1 H2O[c] '''=>''' 1 D-alanine[c] '''+''' 1 a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide[c]
* [[SULFOCYS-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18870]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY0-1586]], peptidoglycan maturation (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1586 PWY0-1586]
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** '''2''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
* METABOLIGHTS : MTBLC33539
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{{#set: direction=LEFT-TO-RIGHT}}
* PUBCHEM:
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{{#set: common name=beta-lactamase}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=439208 439208]
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{{#set: ec number=EC-3.4.16.4}}
* HMDB : HMDB00257
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{{#set: gene associated=Tiso_gene_18870}}
* LIGAND-CPD:
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{{#set: in pathway=PWY0-1586}}
** [http://www.genome.jp/dbget-bin/www_bget?C00320 C00320]
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{{#set: reconstruction category=annotation}}
* CHEMSPIDER:
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{{#set: reconstruction tool=pathwaytools}}
** [http://www.chemspider.com/Chemical-Structure.388348.html 388348]
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{{#set: reconstruction source=in-silico_annotation}}
* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=33539 33539]
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* BIGG : tsul
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{{#set: smiles=O=S(=O)([O-])S}}
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{{#set: inchi key=InChIKey=DHCDFWKWKRSZHF-UHFFFAOYSA-M}}
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{{#set: common name=thiosulfate}}
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{{#set: molecular weight=113.126    }}
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{{#set: common name=S2O3|S2O32-|S2O3-2}}
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{{#set: consumed by=THIOSULFATE-SULFURTRANSFERASE-RXN}}
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{{#set: consumed or produced by=RXN0-6385|SULFOCYS-RXN}}
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Revision as of 16:23, 10 January 2018

Reaction RXN-16649

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • beta-lactamase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide[c] + 1 H2O[c] => 1 D-alanine[c] + 1 a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1586, peptidoglycan maturation (meso-diaminopimelate containing): PWY0-1586
    • 2 reactions found over 12 reactions in the full pathway

Reconstruction information

External links