Difference between revisions of "CPD-17365"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] == * direction: ** REVERSIBL...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17365 CPD-17365] == * smiles: ** CCCCCC=CCC=CCC=CCC=CCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17365 CPD-17365] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CCCCCC=CCC=CCC=CCC=CCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
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** branched-chain_amino_acid_aminotransferase
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** (4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.6.1.6 EC-2.6.1.6]
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** InChIKey=QKBTYZDPVNTERQ-UWVCYPHHSA-J
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** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
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* molecular weight:
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** 1075.997   
 
* Synonym(s):
 
* Synonym(s):
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** (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoyl-Coa
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[LEU]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c]
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* [[RXN-17116]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 L-leucine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 4-methyl-2-oxopentanoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18403]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_14984]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7767]], leucine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7767 PWY-7767]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5076]], L-leucine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18321 18321]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72193701 72193701]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76368 76368]
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* UNIPROT:
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{{#set: smiles=CCCCCC=CCC=CCC=CCC=CCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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{{#set: common name=(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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{{#set: inchi key=InChIKey=QKBTYZDPVNTERQ-UWVCYPHHSA-J}}
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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{{#set: molecular weight=1075.997    }}
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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{{#set: common name=(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoyl-Coa}}
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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{{#set: produced by=RXN-17116}}
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=branched-chain_amino_acid_aminotransferase}}
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{{#set: ec number=EC-2.6.1.6}}
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{{#set: ec number=EC-2.6.1.42}}
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{{#set: gene associated=Tiso_gene_18403|Tiso_gene_14984}}
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{{#set: in pathway=LEU-DEG2-PWY|PWY-7767|LEUSYN-PWY|PWY-5076}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:26, 21 March 2018

Metabolite CPD-17365

  • smiles:
    • CCCCCC=CCC=CCC=CCC=CCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • (4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA
  • inchi key:
    • InChIKey=QKBTYZDPVNTERQ-UWVCYPHHSA-J
  • molecular weight:
    • 1075.997
  • Synonym(s):
    • (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoyl-Coa

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCC=CCC=CCC=CCC=CCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



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