Difference between revisions of "Tiso gene 7213"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF...")
(Created page with "Category:Gene == Gene Tiso_gene_7213 == * right end position: ** 20001 * transcription direction: ** NEGATIVE * left end position: ** 10392 * centisome position: ** 37.087...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] ==
+
== Gene Tiso_gene_7213 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 20001
−
* common name:
+
* transcription direction:
−
** ORF
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/3.5.4.3 EC-3.5.4.3]
+
** 10392
 +
* centisome position:
 +
** 37.087795   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ATPSYN-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GUANINE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHINE]][c]
+
−
* With common name(s):
+
−
** 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 guanine[c] '''=>''' 1 ammonium[c] '''+''' 1 xanthine[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_12280]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-creinhardtii]]
+
−
== Pathways  ==
+
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
+
−
** '''4''' reactions found over '''17''' reactions in the full pathway
+
−
* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
+
−
** '''7''' reactions found over '''24''' reactions in the full pathway
+
−
* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-7219]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=20001}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14665 14665]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=10392}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
+
{{#set: centisome position=37.087795    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=ATPSYN-RXN}}
−
{{#set: common name=ORF}}
+
{{#set: pathway associated=PWY-7219}}
−
{{#set: ec number=EC-3.5.4.3}}
+
−
{{#set: gene associated=Tiso_gene_12280}}
+
−
{{#set: in pathway=P164-PWY|PWY-6608|PWY-5497|PWY-6606}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:27, 21 March 2018

Gene Tiso_gene_7213

  • right end position:
    • 20001
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 10392
  • centisome position:
    • 37.087795
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7213&oldid=41710"