Difference between revisions of "RXN-8037"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
* common name:
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** inosine-5'-phosphate biosynthesis I
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* Synonym(s):
 
* Synonym(s):
** IMP biosynthesis I
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''5''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
* [[AICARSYN-RXN]]
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** 1 [[CPD-7418]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[COUMARIN]][c]
** 0 associated gene:
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* With common name(s):
** 2 reconstruction source(s) associated:
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** 1 coumarinate[c] '''+''' 1 H+[c] '''=>''' 1 H2O[c] '''+''' 1 coumarin[c]
*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
* [[AICARTRANSFORM-RXN]]
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== Pathways  ==
** 1 associated gene(s):
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* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
*** [[Tiso_gene_18420]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
** 4 reconstruction source(s) associated:
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== Reconstruction information  ==
*** [[annotation-experimental_annotation]]
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* Category: [[annotation]]
*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
*** [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
*** [[orthology-esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
* [[IMPCYCLOHYDROLASE-RXN]]
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*** Tool: [[pathwaytools]]
** 1 associated gene(s):
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*** [[Tiso_gene_18420]]
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** 6 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN0-742]]
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** 1 associated gene(s):
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*** [[Tiso_gene_16011]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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* [[SAICARSYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_20436]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-743 RXN0-743]
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== External links  ==
 
== External links  ==
* ECOCYC:
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* LIGAND-RXN:
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6123 PWY-6123]
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** [http://www.genome.jp/dbget-bin/www_bget?R04999 R04999]
{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=inosine-5'-phosphate biosynthesis I}}
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{{#set: in pathway=PWY-5176}}
{{#set: common name=IMP biosynthesis I}}
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{{#set: reconstruction category=annotation}}
{{#set: reaction found=5}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: total reaction=6}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: completion rate=83.0}}
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Latest revision as of 19:29, 21 March 2018

Reaction RXN-8037

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coumarinate[c] + 1 H+[c] => 1 H2O[c] + 1 coumarin[c]

Genes associated with this reaction

Pathways

  • PWY-5176, coumarin biosynthesis (via 2-coumarate): PWY-5176
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links