Difference between revisions of "ASPARTATESYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** trna_intron_ca...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATESYN-PWY ASPARTATESYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATESYN-PWY ASPARTATESYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** ORF
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** L-aspartate biosynthesis
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** trna_intron_catalytic_cterminal_subfamily_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/4.6.1.16 EC-4.6.1.16]
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* Synonym(s):
 
* Synonym(s):
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** L-aspartate biosynthesis and degradation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''1''' reactions in the full pathway
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** 1 [[CPD0-2350]][c] '''=>''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''+''' 1 [[tRNA-Introns]][c]
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* [[ASPAMINOTRANS-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 a polycistronic tRNA precursor[c] '''=>''' 1 a 3'-half-tRNA molecule with a 5'-OH end[c] '''+''' 1 a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end[c] '''+''' 1 a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus[c]
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*** [[Tiso_gene_17718]]
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*** [[Tiso_gene_6815]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_13538]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_15680]]
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* Gene: [[Tiso_gene_3776]]
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*** [[Tiso_gene_17809]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_12889]]
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*** Assignment: EC-NUMBER
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** 7 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_10338]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_5254]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: EC-NUMBER
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*** [[manual-primary_network]]
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== Pathways  ==
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*** [[orthology-creinhardtii]]
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* [[PWY-6689]], tRNA splicing I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689]
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== Reaction(s) not found ==
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7803]], tRNA splicing II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7803 PWY-7803]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* ECOCYC:
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** [http://www.uniprot.org/uniprot/O07118 O07118]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=ASPARTATESYN-PWY ASPARTATESYN-PWY]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=trna_intron_catalytic_cterminal_subfamily_protein}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-4.6.1.16}}
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{{#set: common name=L-aspartate biosynthesis}}
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{{#set: gene associated=Tiso_gene_3776|Tiso_gene_10338|Tiso_gene_5254}}
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{{#set: common name=L-aspartate biosynthesis and degradation}}
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{{#set: in pathway=PWY-6689|PWY-7803}}
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{{#set: reaction found=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=1}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:29, 21 March 2018

Pathway ASPARTATESYN-PWY

  • taxonomic range:
  • common name:
    • L-aspartate biosynthesis
  • Synonym(s):
    • L-aspartate biosynthesis and degradation

Reaction(s) found

1 reactions found over 1 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ASPARTATESYN-PWY&oldid=41918"