Difference between revisions of "R313-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamine_amido...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R313-RXN R313-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_nitrile_hydratase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R313-RXN R313-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** glutamine_amidotransferase
+
** probable_nitrile_hydratase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.84 EC-4.2.1.84]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[3-CYANOPYRIDINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NIACINAMIDE]][c]
 
* With common name(s):
 
* With common name(s):
** 1 ammonium[c] '''+''' 1 XMP[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 GMP[c] '''+''' 1 AMP[c] '''+''' 2 H+[c]
+
** 1 3-cyanopyridine[c] '''+''' 1 H2O[c] '''=>''' 1 nicotinamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* Gene: [[Tiso_gene_6657]]
+
* Gene: [[Tiso_gene_4032]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
** Source: [[annotation-experimental_annotation]]
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[P345-PWY]], aldoxime degradation: [http://metacyc.org/META/NEW-IMAGE?object=P345-PWY P345-PWY]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18301 18301]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=glutamine_amidotransferase}}
+
{{#set: common name=probable_nitrile_hydratase}}
{{#set: gene associated=Tiso_gene_6657}}
+
{{#set: ec number=EC-4.2.1.84}}
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_4032}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: in pathway=P345-PWY}}
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:31, 21 March 2018

Reaction R313-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_nitrile_hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P345-PWY, aldoxime degradation: P345-PWY
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links