Difference between revisions of "RXN1G-499"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-IV-PWY ARGDEG-IV-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-499 RXN1G-499] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-lignoceroyl-[acyl-car...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-IV-PWY ARGDEG-IV-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-499 RXN1G-499] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** L-arginine degradation VIII (arginine oxidase pathway)
+
** 3-oxo-lignoceroyl-[acyl-carrier protein] synthase
 +
** 3-oxoacyl-synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''4''' reactions in the full pathway
+
* With identifiers:
−
* [[GUANIDINOBUTYRASE-RXN]]
+
** 1 [[MALONYL-COA]][c] '''+''' 1 [[Behenoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-lignoceroyl-ACPs]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_4415]]
+
** 1 malonyl-CoA[c] '''+''' 1 a behenoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 coenzyme A[c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-lignoceroyl-[acp][c]
−
** 2 reconstruction source(s) associated:
+
 
−
*** [[annotation-in-silico_annotation]]
+
== Genes associated with this reaction  ==
−
*** [[orthology-synechocystis]]
+
Genes have been associated with this reaction based on different elements listed below.
−
== Reaction(s) not found ==
+
* Gene: [[Tiso_gene_15991]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.54-RXN 1.2.1.54-RXN]
+
** Source: [[orthology-esiliculosus]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.75-RXN 4.1.1.75-RXN]
+
* Gene: [[Tiso_gene_5939]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=ARG-OXIDATION-RXN ARG-OXIDATION-RXN]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_19302]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14485]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
 +
** '''86''' reactions found over '''182''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1224}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=L-arginine degradation VIII (arginine oxidase pathway)}}
+
{{#set: common name=3-oxo-lignoceroyl-[acyl-carrier protein] synthase}}
−
{{#set: reaction found=1}}
+
{{#set: common name=3-oxoacyl-synthase}}
−
{{#set: total reaction=4}}
+
{{#set: ec number=EC-2.3.1.41}}
−
{{#set: completion rate=25.0}}
+
{{#set: gene associated=Tiso_gene_15991|Tiso_gene_5939|Tiso_gene_19302|Tiso_gene_14485}}
 +
{{#set: in pathway=PWYG-321}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction RXN1G-499

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-lignoceroyl-[acyl-carrier protein] synthase
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"3-oxo-lignoceroyl-[acyl-carrier protein] synthase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1G-499&oldid=42395"