Difference between revisions of "PPI"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2023 RXN0-2023] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PPI PPI] == * smiles: ** O=P(O)(OP([O-])([O-])=O)[O-] * common name: ** diphosphate * inchi key...")
 
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[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2023 RXN0-2023] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PPI PPI] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** O=P(O)(OP([O-])([O-])=O)[O-]
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/2.8.1.13 EC-2.8.1.13]
+
** diphosphate
 +
* inchi key:
 +
** InChIKey=XPPKVPWEQAFLFU-UHFFFAOYSA-K
 +
* molecular weight:
 +
** 174.951   
 
* Synonym(s):
 
* Synonym(s):
 +
** PPi
 +
** PP
 +
** pyrophosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[INORGPYROPHOSPHAT-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[tRNA-uridine34]][c] '''+''' 1 [[TusE-S-sulfanylcysteine]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[tRNA-2-thiouridine34]][c] '''+''' 1 [[TusE-L-cysteine]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Acceptor]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
* [[ARGININE--TRNA-LIGASE-RXN]]
−
** 1 ATP[c] '''+''' 1 a uridine34 in tRNA[c] '''+''' 1 a [TusE sulfur carrier protein]-S-sulfanylcysteine[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 a 2-thiouridine34 in tRNA[c] '''+''' 1 a [TusE sulfur carrier protein]-L-cysteine[c] '''+''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an oxidized electron acceptor[c]
+
* [[RXN66-483]]
−
 
+
* [[RXN66-480]]
−
== Genes associated with this reaction  ==
+
* [[RXN-7663]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN0-1602]]
−
* Gene: [[Tiso_gene_2786]]
+
* [[RXN66-484]]
−
** Source: [[orthology-esiliculosus]]
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* [[RXN0-2023]]
−
== Pathways  ==
+
* [[GMP-SYN-GLUT-RXN]]
−
== Reconstruction information  ==
+
* [[RXN66-555]]
−
* Category: [[orthology]]
+
* [[RXN0-7248]]
−
** Source: [[orthology-esiliculosus]]
+
* [[R06284]]
−
*** Tool: [[pantograph]]
+
* [[ACYLCOASYN-RXN]]
 +
* [[ACETATE--COA-LIGASE-RXN]]
 +
* [[DIPHTINE--AMMONIA-LIGASE-RXN]]
 +
* [[DCTP-PYROPHOSPHATASE-RXN]]
 +
* [[ASPARTATE--TRNA-LIGASE-RXN]]
 +
* [[2.5.1.32-RXN]]
 +
* [[THI-P-SYN-RXN]]
 +
* [[R223-RXN]]
 +
* [[RXN-11486]]
 +
* [[HISTPRATPHYD-RXN]]
 +
* [[URACIL-PRIBOSYLTRANS-RXN]]
 +
* [[URITRANS-RXN]]
 +
* [[RXN0-1141]]
 +
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
 +
* [[RXN-7904]]
 +
* [[RXN-16418]]
 +
* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
 +
* [[RXN-7674]]
 +
* [[6.1.1.24-RXN]]
 +
* [[RXN0-383]]
 +
* [[RXN0-384]]
 +
* [[ASNSYNA-RXN]]
 +
* [[DNA-LIGASE-ATP-RXN]]
 +
* [[LYSINE--TRNA-LIGASE-RXN]]
 +
* [[RXN0-6274]]
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 +
* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
 +
* [[RXN-12611]]
 +
* [[PANTEPADENYLYLTRAN-RXN]]
 +
* [[RXN-14139]]
 +
* [[RXN-9386]]
 +
* [[RXN-9623]]
 +
* [[2.5.1.39-RXN]]
 +
* [[4-COUMARATE--COA-LIGASE-RXN]]
 +
* [[RXN-8654]]
 +
* [[ASPARAGINE--TRNA-LIGASE-RXN]]
 +
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
 +
* [[GPPS]]
 +
* [[GLCUR1PUT]]
 +
* [[6.3.4.10-RXN]]
 +
* [[ARGSUCCINSYN-RXN]]
 +
* [[RXN-2001]]
 +
* [[2.7.7.13-RXN]]
 +
* [[DGTD]]
 +
* [[THREONINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-17917]]
 +
* [[GGPS]]
 +
* [[METHIONINE--TRNA-LIGASE-RXN]]
 +
* [[6.2.1.34-RXN]]
 +
* [[XANPRIBOSYLTRAN-RXN]]
 +
* [[RXN-12978]]
 +
* [[NICONUCADENYLYLTRAN-RXN]]
 +
* [[RXN-10919]]
 +
* [[RXN-4305]]
 +
* [[FADSYN-RXN]]
 +
* [[ALANINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-14140]]
 +
* [[RME256]]
 +
* [[RME255]]
 +
* [[RXN0-5107]]
 +
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
 +
* [[RXN0-7239]]
 +
* [[UTPPH]]
 +
* [[RXN0-2161]]
 +
* [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
 +
* [[RXN-9644]]
 +
* [[GSADENYLATION-RXN]]
 +
* [[RXN0-7238]]
 +
* [[RXN-12720]]
 +
* [[ADENYLATECYC-RXN]]
 +
* [[PROLINE--TRNA-LIGASE-RXN]]
 +
* [[NTPD]]
 +
* [[2.7.7.14-RXN]]
 +
* [[QUINOPRIBOTRANS-RXN]]
 +
* [[VALINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-1126]]
 +
* [[S-ADENMETSYN-RXN]]
 +
* [[RXN-16165]]
 +
* [[UG1PUT]]
 +
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 +
* [[FPPSYN-RXN]]
 +
* [[DUTNH]]
 +
* [[FARNESYLTRANSTRANSFERASE-RXN]]
 +
* [[P-PANTOCYSLIG-RXN]]
 +
* [[RXN66-477]]
 +
* [[HISTIDINE--TRNA-LIGASE-RXN]]
 +
* [[RXN66-474]]
 +
* [[RXN-12184]]
 +
* [[RXN-13290]]
 +
* [[RNA-LIGASE-ATP-RXN]]
 +
* [[TYROSINE--TRNA-LIGASE-RXN]]
 +
* [[MRNA-GUANYLYLTRANSFERASE-RXN]]
 +
* [[RXN-16393]]
 +
* [[RXN-16389]]
 +
* [[ASNSYNB-RXN]]
 +
* [[GTP-CYCLOHYDRO-II-RXN]]
 +
* [[TRANS-RXN0-623]]
 +
* [[RXN-12610]]
 +
* [[R06858]]
 +
* [[2.4.2.12-RXN]]
 +
* [[H2PTEROATESYNTH-RXN]]
 +
* [[RXN0-1603]]
 +
* [[RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.]]
 +
* [[RXN0-5515]]
 +
* [[RXN-8999]]
 +
* [[GMP-SYN-NH3-RXN]]
 +
* [[NAG1P-URIDYLTRANS-RXN]]
 +
* [[RXNARA-8002]]
 +
* [[RXN-16401]]
 +
* [[RXN-16402]]
 +
* [[RXN66-469]]
 +
* [[GAMPG]]
 +
* [[SERINE--TRNA-LIGASE-RXN]]
 +
* [[LINOLENOYL-RXN]]
 +
* [[RXN0-6427]]
 +
* [[PANTOATE-BETA-ALANINE-LIG-RXN]]
 +
* [[2.7.7.60-RXN]]
 +
* [[RXN0-7192]]
 +
* [[RXN-16380]]
 +
* [[RNA-3-PHOSPHATE-CYCLASE-RXN]]
 +
* [[RXN-9673]]
 +
* [[NTDP]]
 +
* [[CYSTEINE--TRNA-LIGASE-RXN]]
 +
* [[6.3.4.11-RXN]]
 +
* [[LEUCINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-13614]]
 +
* [[GLYCINE--TRNA-LIGASE-RXN]]
 +
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
 +
* [[ADEC]]
 +
* [[CDPDIGLYSYN-RXN]]
 +
* [[LNLNCACOAL]]
 +
* [[RXN-10]]
 +
* [[HYPOXANPRIBOSYLTRAN-RXN]]
 +
* [[RXN-10695]]
 +
* [[RXN0-5098]]
 +
* [[PRADP]]
 +
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-2541]]
 +
* [[RXN-4303]]
 +
* [[6.3.4.9-RXN]]
 +
* [[BIOTINLIG-RXN]]
 +
* [[PPGPPSYN-RXN]]
 +
* [[RXN-17127]]
 +
* [[LNLCCOAL]]
 +
* [[RXN-12245]]
 +
* [[RXN-9003]]
 +
* [[ITPP]]
 +
* [[RXN-17925]]
 +
* [[GLURS-RXN]]
 +
* [[RXN0-6382]]
 +
* [[FACOAL18111Z]]
 +
* [[DUTP-PYROP-RXN]]
 +
* [[RXN0-385]]
 +
== Reaction(s) of unknown directionality ==
 +
* [[RXN1F-144]]
 +
* [[GUANYLCYC-RXN]]
 +
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
 +
* [[ATPPHOSPHORIBOSYLTRANS-RXN]]
 +
* [[RXN-3701]]
 +
* [[GBDP]]
 +
* [[RXN1F-66]]
 +
* [[2.7.7.11-RXN]]
 +
* [[2.5.1.58-RXN]]
 +
* [[TCM3]]
 +
* [[RXN-13323]]
 +
* [[OROPRIBTRANS-RXN]]
 +
* [[TCP26]]
 +
* [[SULFATE-ADENYLYLTRANS-RXN]]
 +
* [[RXN0-5180]]
 +
* [[RXN-16415]]
 +
* [[RXN-7673]]
 +
* [[PRTRANS-RXN]]
 +
* [[PRPPAMIDOTRANS-RXN]]
 +
* [[UTPHEXPURIDYLYLTRANS-RXN]]
 +
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
 +
* [[DTDPGLUCOSEPP-RXN]]
 +
* [[GUANPRIBOSYLTRAN-RXN]]
 +
* [[GLUC1PURIDYLTRANS-RXN]]
 +
* [[orPRT]]
 +
* [[TCX10]]
 +
* [[2.7.1.90-RXN]]
 +
* [[GPPSYN-RXN]]
 +
* [[POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN]]
 +
* [[2.7.7.44-RXN]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CAS : 2466-09-3
−
{{#set: ec number=EC-2.8.1.13}}
+
* BIGG : ppi
−
{{#set: gene associated=Tiso_gene_2786}}
+
* DRUGBANK : DB04160
−
{{#set: in pathway=}}
+
* PUBCHEM:
−
{{#set: reconstruction category=orthology}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1023 1023]
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
* HMDB : HMDB00250
−
{{#set: reconstruction tool=pantograph}}
+
* LIGAND-CPD:
 +
** [http://www.genome.jp/dbget-bin/www_bget?C00013 C00013]
 +
* CHEMSPIDER:
 +
** [http://www.chemspider.com/Chemical-Structure.996.html 996]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29888 29888]
 +
* METABOLIGHTS : MTBLC33019
 +
{{#set: smiles=O=P(O)(OP([O-])([O-])=O)[O-]}}
 +
{{#set: common name=diphosphate}}
 +
{{#set: inchi key=InChIKey=XPPKVPWEQAFLFU-UHFFFAOYSA-K}}
 +
{{#set: molecular weight=174.951    }}
 +
{{#set: common name=PPi|PP|pyrophosphate}}
 +
{{#set: consumed by=INORGPYROPHOSPHAT-RXN}}
 +
{{#set: produced by=ARGININE--TRNA-LIGASE-RXN|RXN66-483|RXN66-480|RXN-7663|RXN0-1602|RXN66-484|RXN0-2023|GMP-SYN-GLUT-RXN|RXN66-555|RXN0-7248|R06284|ACYLCOASYN-RXN|ACETATE--COA-LIGASE-RXN|DIPHTINE--AMMONIA-LIGASE-RXN|DCTP-PYROPHOSPHATASE-RXN|ASPARTATE--TRNA-LIGASE-RXN|2.5.1.32-RXN|THI-P-SYN-RXN|R223-RXN|RXN-11486|HISTPRATPHYD-RXN|URACIL-PRIBOSYLTRANS-RXN|URITRANS-RXN|RXN0-1141|TRYPTOPHAN--TRNA-LIGASE-RXN|RXN-7904|RXN-16418|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN|RXN-7674|6.1.1.24-RXN|RXN0-383|RXN0-384|ASNSYNA-RXN|DNA-LIGASE-ATP-RXN|LYSINE--TRNA-LIGASE-RXN|RXN0-6274|UBIQUITIN--PROTEIN-LIGASE-RXN|NUCLEOTIDE-PYROPHOSPHATASE-RXN|RXN-12611|PANTEPADENYLYLTRAN-RXN|RXN-14139|RXN-9386|RXN-9623|2.5.1.39-RXN|4-COUMARATE--COA-LIGASE-RXN|RXN-8654|ASPARAGINE--TRNA-LIGASE-RXN|GLUTAMINE--TRNA-LIGASE-RXN|GPPS|GLCUR1PUT|6.3.4.10-RXN|ARGSUCCINSYN-RXN|RXN-2001|2.7.7.13-RXN|DGTD|THREONINE--TRNA-LIGASE-RXN|RXN-17917|GGPS|METHIONINE--TRNA-LIGASE-RXN|6.2.1.34-RXN|XANPRIBOSYLTRAN-RXN|RXN-12978|NICONUCADENYLYLTRAN-RXN|RXN-10919|RXN-4305|FADSYN-RXN|ALANINE--TRNA-LIGASE-RXN|RXN-14140|RME256|RME255|RXN0-5107|DNA-DIRECTED-DNA-POLYMERASE-RXN|RXN0-7239|UTPPH|RXN0-2161|4OHBENZOATE-OCTAPRENYLTRANSFER-RXN|RXN-9644|GSADENYLATION-RXN|RXN0-7238|RXN-12720|ADENYLATECYC-RXN|PROLINE--TRNA-LIGASE-RXN|NTPD|2.7.7.14-RXN|QUINOPRIBOTRANS-RXN|VALINE--TRNA-LIGASE-RXN|RXN-1126|S-ADENMETSYN-RXN|RXN-16165|UG1PUT|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|FPPSYN-RXN|DUTNH|FARNESYLTRANSTRANSFERASE-RXN|P-PANTOCYSLIG-RXN|RXN66-477|HISTIDINE--TRNA-LIGASE-RXN|RXN66-474|RXN-12184|RXN-13290|RNA-LIGASE-ATP-RXN|TYROSINE--TRNA-LIGASE-RXN|MRNA-GUANYLYLTRANSFERASE-RXN|RXN-16393|RXN-16389|ASNSYNB-RXN|GTP-CYCLOHYDRO-II-RXN|TRANS-RXN0-623|RXN-12610|R06858|2.4.2.12-RXN|H2PTEROATESYNTH-RXN|RXN0-1603|RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.|RXN0-5515|RXN-8999|GMP-SYN-NH3-RXN|NAG1P-URIDYLTRANS-RXN|RXNARA-8002|RXN-16401|RXN-16402|RXN66-469|GAMPG|SERINE--TRNA-LIGASE-RXN|LINOLENOYL-RXN|RXN0-6427|PANTOATE-BETA-ALANINE-LIG-RXN|2.7.7.60-RXN|RXN0-7192|RXN-16380|RNA-3-PHOSPHATE-CYCLASE-RXN|RXN-9673|NTDP|CYSTEINE--TRNA-LIGASE-RXN|6.3.4.11-RXN|LEUCINE--TRNA-LIGASE-RXN|RXN-13614|GLYCINE--TRNA-LIGASE-RXN|PHENYLALANINE--TRNA-LIGASE-RXN|ADEC|CDPDIGLYSYN-RXN|LNLNCACOAL|RXN-10|HYPOXANPRIBOSYLTRAN-RXN|RXN-10695|RXN0-5098|PRADP|ISOLEUCINE--TRNA-LIGASE-RXN|RXN-2541|RXN-4303|6.3.4.9-RXN|BIOTINLIG-RXN|PPGPPSYN-RXN|RXN-17127|LNLCCOAL|RXN-12245|RXN-9003|ITPP|RXN-17925|GLURS-RXN|RXN0-6382|FACOAL18111Z|DUTP-PYROP-RXN|RXN0-385}}
 +
{{#set: reversible reaction associated=RXN1F-144|GUANYLCYC-RXN|RNA-DIRECTED-DNA-POLYMERASE-RXN|ATPPHOSPHORIBOSYLTRANS-RXN|RXN-3701|GBDP|RXN1F-66|2.7.7.11-RXN|2.5.1.58-RXN|TCM3|RXN-13323|OROPRIBTRANS-RXN|TCP26|SULFATE-ADENYLYLTRANS-RXN|RXN0-5180|RXN-16415|RXN-7673|PRTRANS-RXN|PRPPAMIDOTRANS-RXN|UTPHEXPURIDYLYLTRANS-RXN|DNA-DIRECTED-RNA-POLYMERASE-RXN|DTDPGLUCOSEPP-RXN|GUANPRIBOSYLTRAN-RXN|GLUC1PURIDYLTRANS-RXN|orPRT|TCX10|2.7.1.90-RXN|GPPSYN-RXN|POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN|2.7.7.44-RXN}}

Latest revision as of 19:33, 21 March 2018

Metabolite PPI

  • smiles:
    • O=P(O)(OP([O-])([O-])=O)[O-]
  • common name:
    • diphosphate
  • inchi key:
    • InChIKey=XPPKVPWEQAFLFU-UHFFFAOYSA-K
  • molecular weight:
    • 174.951
  • Synonym(s):
    • PPi
    • PP
    • pyrophosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 2466-09-3
  • BIGG : ppi
  • DRUGBANK : DB04160
  • PUBCHEM:
  • HMDB : HMDB00250
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC33019
"O=P(O)(OP([O-])([O-])=O)[O-" cannot be used as a page name in this wiki.




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