Difference between revisions of "PEROXID-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7767 PWY-7767] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEROXID-RXN PEROXID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ascorbate_peroxidase **...")
 
Line 1: Line 1:
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[[Category:Pathway]]
+
[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7767 PWY-7767] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEROXID-RXN PEROXID-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** leucine degradation IV
+
** ascorbate_peroxidase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''5''' reactions in the full pathway
+
* With identifiers:
−
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
+
** 2 [[Phenolic-Donors]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[Phenoxyl-rad-of-phenolic-donors]][c] '''+''' 2 [[WATER]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_18403]]
+
** 2 a phenolic donor[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 2 a phenoxyl radical of a phenolic donor[c] '''+''' 2 H2O[c]
−
*** [[Tiso_gene_14984]]
+
 
−
** 5 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-experimental_annotation]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[manual-primary_network]]
+
* Gene: [[Tiso_gene_6431]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_16028]]
−
*** [[orthology-esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
== Reaction(s) not found ==
+
* Gene: [[Tiso_gene_15820]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16245 RXN-16245]
+
** Source: [[annotation-in-silico_annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16246 RXN-16246]
+
*** Assignment: EC-NUMBER
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16247 RXN-16247]
+
* Gene: [[Tiso_gene_5857]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17524 RXN-17524]
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_7067]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_19683]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9359]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11016]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17551]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15962]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_20206]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
* UNIPROT:
−
{{#set: common name=leucine degradation IV}}
+
** [http://www.uniprot.org/uniprot/P11678 P11678]
−
{{#set: reaction found=1}}
+
** [http://www.uniprot.org/uniprot/P80025 P80025]
−
{{#set: total reaction=5}}
+
** [http://www.uniprot.org/uniprot/P22195 P22195]
−
{{#set: completion rate=20.0}}
+
** [http://www.uniprot.org/uniprot/P11965 P11965]
 +
** [http://www.uniprot.org/uniprot/P05164 P05164]
 +
** [http://www.uniprot.org/uniprot/P22196 P22196]
 +
** [http://www.uniprot.org/uniprot/P13029 P13029]
 +
** [http://www.uniprot.org/uniprot/Q42853 Q42853]
 +
** [http://www.uniprot.org/uniprot/Q26059 Q26059]
 +
** [http://www.uniprot.org/uniprot/O24081 O24081]
 +
** [http://www.uniprot.org/uniprot/Q43790 Q43790]
 +
** [http://www.uniprot.org/uniprot/Q43791 Q43791]
 +
** [http://www.uniprot.org/uniprot/O24080 O24080]
 +
** [http://www.uniprot.org/uniprot/P22079 P22079]
 +
** [http://www.uniprot.org/uniprot/P17179 P17179]
 +
** [http://www.uniprot.org/uniprot/P17180 P17180]
 +
** [http://www.uniprot.org/uniprot/Q24926 Q24926]
 +
** [http://www.uniprot.org/uniprot/Q43854 Q43854]
 +
** [http://www.uniprot.org/uniprot/P14412 P14412]
 +
** [http://www.uniprot.org/uniprot/P24101 P24101]
 +
** [http://www.uniprot.org/uniprot/P24102 P24102]
 +
** [http://www.uniprot.org/uniprot/P00434 P00434]
 +
** [http://www.uniprot.org/uniprot/P00433 P00433]
 +
** [http://www.uniprot.org/uniprot/Q9S913 Q9S913]
 +
** [http://www.uniprot.org/uniprot/Q9S912 Q9S912]
 +
** [http://www.uniprot.org/uniprot/Q9S911 Q9S911]
 +
** [http://www.uniprot.org/uniprot/P15232 P15232]
 +
** [http://www.uniprot.org/uniprot/P15233 P15233]
 +
** [http://www.uniprot.org/uniprot/P15003 P15003]
 +
** [http://www.uniprot.org/uniprot/P15004 P15004]
 +
** [http://www.uniprot.org/uniprot/P15984 P15984]
 +
** [http://www.uniprot.org/uniprot/P11247 P11247]
 +
** [http://www.uniprot.org/uniprot/P12437 P12437]
 +
** [http://www.uniprot.org/uniprot/P06181 P06181]
 +
** [http://www.uniprot.org/uniprot/P19135 P19135]
 +
** [http://www.uniprot.org/uniprot/Q05855 Q05855]
 +
** [http://www.uniprot.org/uniprot/Q43212 Q43212]
 +
** [http://www.uniprot.org/uniprot/Q42517 Q42517]
 +
** [http://www.uniprot.org/uniprot/Q7M1X2 Q7M1X2]
 +
** [http://www.uniprot.org/uniprot/Q01548 Q01548]
 +
** [http://www.uniprot.org/uniprot/Q43006 Q43006]
 +
** [http://www.uniprot.org/uniprot/Q40069 Q40069]
 +
** [http://www.uniprot.org/uniprot/Q16771 Q16771]
 +
** [http://www.uniprot.org/uniprot/P16147 P16147]
 +
** [http://www.uniprot.org/uniprot/Q01603 Q01603]
 +
** [http://www.uniprot.org/uniprot/Q12575 Q12575]
 +
** [http://www.uniprot.org/uniprot/Q43774 Q43774]
 +
** [http://www.uniprot.org/uniprot/Q42854 Q42854]
 +
** [http://www.uniprot.org/uniprot/Q9SMU8 Q9SMU8]
 +
** [http://www.uniprot.org/uniprot/Q43158 Q43158]
 +
** [http://www.uniprot.org/uniprot/Q07446 Q07446]
 +
** [http://www.uniprot.org/uniprot/Q43032 Q43032]
 +
** [http://www.uniprot.org/uniprot/Q41577 Q41577]
 +
** [http://www.uniprot.org/uniprot/Q43218 Q43218]
 +
** [http://www.uniprot.org/uniprot/Q43219 Q43219]
 +
** [http://www.uniprot.org/uniprot/Q43220 Q43220]
 +
** [http://www.uniprot.org/uniprot/Q55110 Q55110]
 +
** [http://www.uniprot.org/uniprot/Q96518 Q96518]
 +
** [http://www.uniprot.org/uniprot/O22510 O22510]
 +
** [http://www.uniprot.org/uniprot/O80912 O80912]
 +
** [http://www.uniprot.org/uniprot/Q40486 Q40486]
 +
** [http://www.uniprot.org/uniprot/Q40487 Q40487]
 +
** [http://www.uniprot.org/uniprot/Q40555 Q40555]
 +
** [http://www.uniprot.org/uniprot/Q42964 Q42964]
 +
** [http://www.uniprot.org/uniprot/Q43004 Q43004]
 +
** [http://www.uniprot.org/uniprot/P37834 P37834]
 +
** [http://www.uniprot.org/uniprot/P37835 P37835]
 +
** [http://www.uniprot.org/uniprot/P93675 P93675]
 +
** [http://www.uniprot.org/uniprot/O24523 O24523]
 +
** [http://www.uniprot.org/uniprot/O49866 O49866]
 +
** [http://www.uniprot.org/uniprot/Q43731 Q43731]
 +
** [http://www.uniprot.org/uniprot/Q9SZE7 Q9SZE7]
 +
** [http://www.uniprot.org/uniprot/O22443 O22443]
 +
** [http://www.uniprot.org/uniprot/Q9SZB9 Q9SZB9]
 +
** [http://www.uniprot.org/uniprot/P27337 P27337]
 +
** [http://www.uniprot.org/uniprot/Q40068 Q40068]
 +
** [http://www.uniprot.org/uniprot/O64970 O64970]
 +
** [http://www.uniprot.org/uniprot/Q42784 Q42784]
 +
** [http://www.uniprot.org/uniprot/Q43499 Q43499]
 +
** [http://www.uniprot.org/uniprot/Q07445 Q07445]
 +
** [http://www.uniprot.org/uniprot/O22602 O22602]
 +
** [http://www.uniprot.org/uniprot/O65029 O65029]
 +
** [http://www.uniprot.org/uniprot/P93545 P93545]
 +
** [http://www.uniprot.org/uniprot/P93546 P93546]
 +
** [http://www.uniprot.org/uniprot/P93547 P93547]
 +
** [http://www.uniprot.org/uniprot/P93548 P93548]
 +
** [http://www.uniprot.org/uniprot/P93549 P93549]
 +
** [http://www.uniprot.org/uniprot/P93550 P93550]
 +
** [http://www.uniprot.org/uniprot/P93551 P93551]
 +
** [http://www.uniprot.org/uniprot/P93552 P93552]
 +
** [http://www.uniprot.org/uniprot/P93553 P93553]
 +
** [http://www.uniprot.org/uniprot/O49940 O49940]
 +
** [http://www.uniprot.org/uniprot/O49941 O49941]
 +
** [http://www.uniprot.org/uniprot/O49943 O49943]
 +
** [http://www.uniprot.org/uniprot/O49942 O49942]
 +
** [http://www.uniprot.org/uniprot/Q40949 Q40949]
 +
** [http://www.uniprot.org/uniprot/Q40950 Q40950]
 +
** [http://www.uniprot.org/uniprot/Q40366 Q40366]
 +
** [http://www.uniprot.org/uniprot/Q40367 Q40367]
 +
** [http://www.uniprot.org/uniprot/O24336 O24336]
 +
** [http://www.uniprot.org/uniprot/Q39652 Q39652]
 +
** [http://www.uniprot.org/uniprot/Q39653 Q39653]
 +
** [http://www.uniprot.org/uniprot/Q08671 Q08671]
 +
** [http://www.uniprot.org/uniprot/Q9SUT2 Q9SUT2]
 +
** [http://www.uniprot.org/uniprot/Q96522 Q96522]
 +
** [http://www.uniprot.org/uniprot/O81266 O81266]
 +
** [http://www.uniprot.org/uniprot/Q20616 Q20616]
 +
** [http://www.uniprot.org/uniprot/Q23490 Q23490]
 +
** [http://www.uniprot.org/uniprot/O59651 O59651]
 +
** [http://www.uniprot.org/uniprot/O31066 O31066]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ascorbate_peroxidase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-1.11.1.7}}
 +
{{#set: gene associated=Tiso_gene_6431|Tiso_gene_16028|Tiso_gene_15820|Tiso_gene_5857|Tiso_gene_7067|Tiso_gene_19683|Tiso_gene_9359|Tiso_gene_11016|Tiso_gene_17551|Tiso_gene_15962|Tiso_gene_20206}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:34, 21 March 2018

Reaction PEROXID-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ascorbate_peroxidase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PEROXID-RXN&oldid=42490"