Difference between revisions of "Tiso gene 19115"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8042 RXN-8042] == * direction: ** LEFT-TO-RIGHT * common name: ** carotene_isomerase ** caroten...")
(Created page with "Category:Gene == Gene Tiso_gene_19115 == * Synonym(s): == Reactions associated == * Reaction: 5FTHFt ** Source: orthology-creinhardtii * Reaction: 5FTHFtm **...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8042 RXN-8042] ==
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== Gene Tiso_gene_19115 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** carotene_isomerase
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** carotenoid_isomerase
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* ec number:
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** [http://enzyme.expasy.org/EC/5.2.1.13 EC-5.2.1.13]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[5FTHFt]]
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** 1 [[CPD-7496]][c] '''=>''' 1 [[CPD1F-114]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[5FTHFtm]]
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** 1 prolycopene[c] '''=>''' 1 all-trans-lycopene[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[METHFth]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[METHFtm]]
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* Gene: [[Tiso_gene_13369]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* Reaction: [[METHFtx]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_13367]]
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* Reaction: [[MLTHFtm]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Reaction: [[THFtm]]
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* Gene: [[Tiso_gene_917]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_916]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15802]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_915]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=5FTHFt|5FTHFtm|METHFth|METHFtm|METHFtx|MLTHFtm|THFtm}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30974 30974]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07512 R07512]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=carotene_isomerase}}
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{{#set: common name=carotenoid_isomerase}}
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{{#set: ec number=EC-5.2.1.13}}
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{{#set: gene associated=Tiso_gene_13369|Tiso_gene_13367|Tiso_gene_917|Tiso_gene_916|Tiso_gene_15802|Tiso_gene_915}}
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{{#set: in pathway=PWY-6475}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:34, 21 March 2018

Gene Tiso_gene_19115

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19115&oldid=42496"