Difference between revisions of "PWY0-1275"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1321 RXN-1321] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoxygenase * ec number: **...")
 
(Created page with "Category:Gene == Gene Tiso_gene_12554 == * left end position: ** 1270 * transcription direction: ** NEGATIVE * right end position: ** 3588 * centisome position: ** 18.4244...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1321 RXN-1321] ==
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== Gene Tiso_gene_12554 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1270
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* common name:
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* transcription direction:
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** lipoxygenase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.13.11.12 EC-1.13.11.12]
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** 3588
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* centisome position:
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** 18.424488   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GUANYL-KIN-RXN]]
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** 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-725]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 α-linolenate[c] '''+''' 1 oxygen[c] '''=>''' 1 13(S)-HPOTE[c]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7221]]
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* [[Tiso_gene_4463]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1270}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34495 34495]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3588}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07869 R07869]
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{{#set: centisome position=18.424488    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=GUANYL-KIN-RXN}}
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{{#set: common name=lipoxygenase}}
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{{#set: pathway associated=PWY-7221}}
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{{#set: ec number=EC-1.13.11.12}}
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{{#set: gene associated=Tiso_gene_4463}}
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{{#set: in pathway=PWY-5410|PWY-735}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:24, 10 January 2018

Gene Tiso_gene_12554

  • left end position:
    • 1270
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3588
  • centisome position:
    • 18.424488
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-1275&oldid=12791"