Difference between revisions of "FORMYLMETHIONINE-DEFORMYLASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5324 PWY-5324] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLMETHIONINE-DEFORMYLASE-RXN FORMYLMETHIONINE-DEFORMYLASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5324 PWY-5324] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLMETHIONINE-DEFORMYLASE-RXN FORMYLMETHIONINE-DEFORMYLASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-lysine degradation IX
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** polypeptide_deformylase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.31 EC-3.5.1.31]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[RXN-8173]]
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** 1 [[WATER]][c] '''+''' 1 [[N-FORMYLMETHIONINE]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[MET]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 H2O[c] '''+''' 1 N-formyl-L-methionine[c] '''=>''' 1 formate[c] '''+''' 1 L-methionine[c]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--PYRUVATE-6-AMINOTRANSFERASE-RXN LYSINE--PYRUVATE-6-AMINOTRANSFERASE-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_14998]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* RHEA:
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{{#set: common name=L-lysine degradation IX}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17781 17781]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: total reaction=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00653 R00653]
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{{#set: completion rate=50.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P63916 P63916]
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** [http://www.uniprot.org/uniprot/Q9PIT8 Q9PIT8]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=polypeptide_deformylase}}
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{{#set: ec number=EC-3.5.1.31}}
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{{#set: gene associated=Tiso_gene_14998}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:38, 21 March 2018

Reaction FORMYLMETHIONINE-DEFORMYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polypeptide_deformylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 N-formyl-L-methionine[c] => 1 formate[c] + 1 L-methionine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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