Difference between revisions of "RXN-17795"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17795 RXN-17795] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** 3-ketoacyl-_thi...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17795 RXN-17795] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-200918]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200940 TAX-200940]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-544448 TAX-544448]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-508458 TAX-508458]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203691 TAX-203691]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203682 TAX-203682]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40117 TAX-40117]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-142182 TAX-142182]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-32066 TAX-32066]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783270 TAX-1783270]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-74152 TAX-74152]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68297 TAX-68297]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1297 TAX-1297]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200930 TAX-200930]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200938 TAX-200938]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783257 TAX-1783257]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-67814 TAX-67814]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
 
* common name:
 
* common name:
−
** O-antigen building blocks biosynthesis (E. coli)
+
** thiolase
 +
** 3-ketoacyl-_thiolase
 +
** acetyl-_c-acetyltransferase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''5''' reactions in the full pathway
+
* With identifiers:
−
* [[DTDPRHAMSYN-PWY]]
+
** 1 [[CPD-19157]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-19148]][c]
−
** 0 associated gene:
+
* With common name(s):
−
* [[GALPMUT-RXN]]
+
** 1 3-oxo-(7Z)-tetradecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 (5Z)-dodecenoyl-CoA[c]
−
** 2 associated gene(s):
+
 
−
*** [[Tiso_gene_15395]]
+
== Genes associated with this reaction  ==
−
*** [[Tiso_gene_3775]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** 2 reconstruction source(s) associated:
+
* Gene: [[Tiso_gene_3855]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-experimental_annotation]]
+
*** Assignment: EC-NUMBER
−
* [[UDPNAGSYN-PWY]]
+
** Source: [[annotation-experimental_annotation]]
−
** 0 associated gene:
+
*** Assignment: EC-NUMBER
−
== Reaction(s) not found ==
+
* Gene: [[Tiso_gene_15327]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17451]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10116]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3856]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY]
+
{{#set: common name=thiolase}}
−
{{#set: taxonomic range=TAX-200918}}
+
{{#set: common name=3-ketoacyl-_thiolase}}
−
{{#set: taxonomic range=TAX-200940}}
+
{{#set: common name=acetyl-_c-acetyltransferase}}
−
{{#set: taxonomic range=TAX-544448}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: taxonomic range=TAX-508458}}
+
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_3856}}
−
{{#set: taxonomic range=TAX-203691}}
+
{{#set: in pathway=}}
−
{{#set: taxonomic range=TAX-203682}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: taxonomic range=TAX-40117}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: taxonomic range=TAX-142182}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: taxonomic range=TAX-32066}}
+
−
{{#set: taxonomic range=TAX-1783270}}
+
−
{{#set: taxonomic range=TAX-74152}}
+
−
{{#set: taxonomic range=TAX-68297}}
+
−
{{#set: taxonomic range=TAX-1297}}
+
−
{{#set: taxonomic range=TAX-200930}}
+
−
{{#set: taxonomic range=TAX-1117}}
+
−
{{#set: taxonomic range=TAX-200938}}
+
−
{{#set: taxonomic range=TAX-200795}}
+
−
{{#set: taxonomic range=TAX-1783257}}
+
−
{{#set: taxonomic range=TAX-67814}}
+
−
{{#set: taxonomic range=TAX-68336}}
+
−
{{#set: taxonomic range=TAX-200783}}
+
−
{{#set: taxonomic range=TAX-1224}}
+
−
{{#set: common name=O-antigen building blocks biosynthesis (E. coli)}}
+
−
{{#set: reaction found=3}}
+
−
{{#set: total reaction=5}}
+
−
{{#set: completion rate=60.0}}
+

Latest revision as of 19:39, 21 March 2018

Reaction RXN-17795

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • 3-ketoacyl-_thiolase
    • acetyl-_c-acetyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-(7Z)-tetradecenoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 (5Z)-dodecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17795&oldid=42974"