Difference between revisions of "RXN-9003"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_1587 == * right end position: ** 9663 * transcription direction: ** POSITIVE * left end position: ** 8970 * centisome position: ** 38.92891...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * ec number: | |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39] |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | * | + | ** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[ALL-TRANS-HEXAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[3-HEXAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c] |
| − | *** | + | * With common name(s): |
| − | * | + | ** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-hexaprenyl diphosphate[c] '''=>''' 1 3-hexaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c] |
| − | ** Source: [[ | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | == Pathways | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[PWY- | + | * Gene: [[Tiso_gene_2848]] |
| + | ** Source: [[orthology-athaliana]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_11582]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | * Gene: [[Tiso_gene_18201]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | * Gene: [[Tiso_gene_10317]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19] | ||
| + | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-7235]], superpathway of ubiquinol-6 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7235 PWY-7235] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: ec number=EC-2.5.1.39}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_2848|Tiso_gene_11582|Tiso_gene_18201|Tiso_gene_10317}} |
| − | {{#set: | + | {{#set: in pathway=PWY3O-19|PWY-7235}} |
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 19:39, 21 March 2018
Contents
Reaction RXN-9003
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 4-hydroxybenzoate[c] + 1 ALL-TRANS-HEXAPRENYL-DIPHOSPHATE[c] => 1 3-HEXAPRENYL-4-HYDROXYBENZOATE[c] + 1 PPI[c]
- With common name(s):
- 1 4-hydroxybenzoate[c] + 1 all-trans-hexaprenyl diphosphate[c] => 1 3-hexaprenyl-4-hydroxybenzoate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2848
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Gene: Tiso_gene_11582
- Source: orthology-athaliana
- Gene: Tiso_gene_18201
- Source: orthology-athaliana
- Gene: Tiso_gene_10317
- Source: orthology-esiliculosus
Pathways
- PWY3O-19, ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): PWY3O-19
- 1 reactions found over 8 reactions in the full pathway
- PWY-7235, superpathway of ubiquinol-6 biosynthesis (eukaryotic): PWY-7235
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
External links
- LIGAND-RXN:
