Difference between revisions of "ALDOSE1EPIM-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE1EPIM-RXN ALDOSE1EPIM-RXN] == * direction: ** REVERSIBLE * common name: ** aldose_1-epimerase...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE1EPIM-RXN ALDOSE1EPIM-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
 
* common name:
 
* common name:
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** (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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** aldose_1-epimerase
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* ec number:
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** [http://enzyme.expasy.org/EC/5.1.3.3 EC-5.1.3.3]
 
* Synonym(s):
 
* Synonym(s):
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** (R)- and (S)-3-hydroxybutyrate biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** 1 [[GALACTOSE]][c] '''<=>''' 1 [[ALPHA-D-GALACTOSE]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_16181]]
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** 1 &beta;-D-galactose[c] '''<=>''' 1 &alpha;-D-galactose[c]
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*** [[Tiso_gene_15327]]
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*** [[Tiso_gene_17451]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_17734]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19779]]
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* [[RXN-11662]]
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** Source: [[annotation-in-silico_annotation]]
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** 7 associated gene(s):
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_16703]]
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== Pathways  ==
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*** [[Tiso_gene_14027]]
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* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
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*** [[Tiso_gene_14262]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_14026]]
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* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
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*** [[Tiso_gene_18838]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_18839]]
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== Reconstruction information  ==
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*** [[Tiso_gene_5857]]
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* Category: [[annotation]]
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** 5 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-5901]]
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** 9 associated gene(s):
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_6563]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_5424]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_6562]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_5425]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14251 RXN-14251]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14255 RXN-14255]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28675 28675]
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{{#set: common name=(R)- and (S)-3-hydroxybutyrate biosynthesis}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction found=3}}
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{{#set: common name=aldose_1-epimerase}}
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{{#set: total reaction=5}}
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{{#set: ec number=EC-5.1.3.3}}
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{{#set: completion rate=60.0}}
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{{#set: gene associated=Tiso_gene_17734|Tiso_gene_19779}}
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{{#set: in pathway=PWY-6317|PWY66-422}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction ALDOSE1EPIM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • aldose_1-epimerase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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