Difference between revisions of "PWY-7117"

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(Created page with "Category:Gene == Gene Tiso_gene_8035 == * right end position: ** 9857 * transcription direction: ** POSITIVE * left end position: ** 6898 * centisome position: ** 37.47691...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
 
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_8035 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117] ==
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* right end position:
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* taxonomic range:
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** 9857
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4479 TAX-4479]
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** POSITIVE
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* common name:
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* left end position:
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** C4 photosynthetic carbon assimilation cycle, PEPCK type
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** 6898
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* centisome position:
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** 37.47691   
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* Synonym(s):
 
* Synonym(s):
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** C4 photosynthesis, PEPCK type
  
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== Reactions associated ==
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== Reaction(s) found ==
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* Reaction: [[GTP-CYCLOHYDRO-II-RXN]]
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'''7''' reactions found over '''10''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[ALANINE-AMINOTRANSFERASE-RXN]]
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*** Assignment: ec-number
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** 2 associated gene(s):
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* Reaction: [[RIBOFLAVINSYNREDUC-RXN]]
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*** [[Tiso_gene_5959]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10957]]
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*** Assignment: ec-number
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** 5 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** [[orthology-athaliana]]
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* [[PWY-7539]]
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6168]]
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*** [[manual-primary_network]]
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* [[RIBOSYN2-PWY]]
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*** [[orthology-esiliculosus]]
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* [[ASPAMINOTRANS-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_17718]]
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*** [[Tiso_gene_6815]]
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*** [[Tiso_gene_13538]]
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*** [[Tiso_gene_15680]]
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*** [[Tiso_gene_17809]]
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*** [[Tiso_gene_12889]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[MALIC-NADP-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_12200]]
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*** [[Tiso_gene_6675]]
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*** [[Tiso_gene_12896]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[PEPCARBOXYKIN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_19475]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[RXN-13697]]
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** 6 associated gene(s):
 +
*** [[Tiso_gene_13538]]
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*** [[Tiso_gene_12889]]
 +
*** [[Tiso_gene_6815]]
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*** [[Tiso_gene_17718]]
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*** [[Tiso_gene_17809]]
 +
*** [[Tiso_gene_15680]]
 +
** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-13698]]
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** 2 associated gene(s):
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*** [[Tiso_gene_10957]]
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*** [[Tiso_gene_5959]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN0-5224]]
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** 10 associated gene(s):
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*** [[Tiso_gene_18927]]
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*** [[Tiso_gene_6150]]
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*** [[Tiso_gene_1600]]
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*** [[Tiso_gene_3056]]
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*** [[Tiso_gene_9852]]
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*** [[Tiso_gene_17511]]
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*** [[Tiso_gene_19413]]
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*** [[Tiso_gene_20230]]
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*** [[Tiso_gene_19414]]
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*** [[Tiso_gene_7660]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: right end position=9857}}
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{{#set: taxonomic range=TAX-3398}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-4479}}
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{{#set: left end position=6898}}
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{{#set: common name=C4 photosynthetic carbon assimilation cycle, PEPCK type}}
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{{#set: centisome position=37.47691    }}
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{{#set: common name=C4 photosynthesis, PEPCK type}}
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{{#set: reaction associated=GTP-CYCLOHYDRO-II-RXN|RIBOFLAVINSYNREDUC-RXN}}
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{{#set: reaction found=7}}
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{{#set: pathway associated=PWY-7539|PWY-6168|RIBOSYN2-PWY}}
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{{#set: total reaction=10}}
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{{#set: completion rate=70.0}}

Latest revision as of 19:40, 21 March 2018

Pathway PWY-7117

  • taxonomic range:
  • common name:
    • C4 photosynthetic carbon assimilation cycle, PEPCK type
  • Synonym(s):
    • C4 photosynthesis, PEPCK type

Reaction(s) found

7 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7117&oldid=43125"