Difference between revisions of "Tiso gene 9922"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7008 RXN0-7008] == * direction: ** LEFT-TO-RIGHT * common name: ** proline_dehydrogenase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_9922 == * right end position: ** 6446 * transcription direction: ** NEGATIVE * left end position: ** 4457 * centisome position: ** 49.67123...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7008 RXN0-7008] ==
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== Gene Tiso_gene_9922 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6446
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* common name:
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* transcription direction:
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** proline_dehydrogenase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.5.5.2 EC-1.5.5.2]
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** 4457
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* centisome position:
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** 49.671234   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3PGAREARR-RXN]]
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** 1 [[PRO]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[Ubiquinols]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-proline[c] '''+''' 1 a ubiquinone[c] '''=>''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 an ubiquinol[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-15509]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15510]]
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* Gene: [[Tiso_gene_18825]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_18826]]
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* Reaction: [[RXN-15511]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_9762]]
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* Reaction: [[RXN-15512]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15513]]
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== Pathways  ==
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* [[PWY0-1544]], proline to cytochrome bo oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1544 PWY0-1544]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY-2221]]
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* [[PWY-1622]]
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* [[GLUCONEO-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6901]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-7218]]
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* [[PWY-6405]]
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* [[P124-PWY]]
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* [[PWY-6886]]
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* [[PWY66-399]]
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* [[PWY-5723]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[PWY-7124]]
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* [[P122-PWY]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6446}}
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{{#set: common name=proline_dehydrogenase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-1.5.5.2}}
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{{#set: left end position=4457}}
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{{#set: gene associated=Tiso_gene_18825|Tiso_gene_18826|Tiso_gene_9762}}
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{{#set: centisome position=49.671234    }}
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{{#set: in pathway=PWY0-1544}}
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{{#set: reaction associated=3PGAREARR-RXN|RXN-15509|RXN-15510|RXN-15511|RXN-15512|RXN-15513}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|PWY-7218|PWY-6405|P124-PWY|PWY-6886|PWY66-399|PWY-5723|PWY-6142|PWY-5484|PWY-7124|P122-PWY|PWY-7003}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:40, 21 March 2018

Gene Tiso_gene_9922

  • right end position:
    • 6446
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4457
  • centisome position:
    • 49.671234
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9922&oldid=43150"