Difference between revisions of "RXN-15013"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GDPRHAMSYN-PWY GDPRHAMSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15013 RXN-15013] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GDPRHAMSYN-PWY GDPRHAMSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15013 RXN-15013] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* common name:
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** GDP-D-rhamnose biosynthesis
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* Synonym(s):
 
* Synonym(s):
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** GDP-α-D-rhamnose biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[GDPMANDEHYDRA-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-15900]][c] '''<=>''' 1 [[3-HYDROXYPIMELYL-COA]][c] '''+''' 1 [[PROTON]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_13093]]
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** 1 H2O[c] '''+''' 1 2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA[c] '''<=>''' 1 3-hydroxypimeloyl-CoA[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_13092]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_7477]]
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*** [[orthology-esiliculosus]]
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** Source: [[orthology-athaliana]]
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== Reaction(s) not found ==
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GDP-4-DEHYDRO-D-RHAMNOSE-REDUCTASE-RXN GDP-4-DEHYDRO-D-RHAMNOSE-REDUCTASE-RXN]
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* [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=CENTBENZCOA-PWY CENTBENZCOA-PWY]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
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** '''5''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1239}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: gene associated=Tiso_gene_7477}}
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{{#set: common name=GDP-D-rhamnose biosynthesis}}
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{{#set: in pathway=CENTBENZCOA-PWY|PWY-7401}}
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{{#set: common name=GDP-&alpha;-D-rhamnose biosynthesis}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=1}}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: total reaction=2}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: completion rate=50.0}}
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Latest revision as of 19:41, 21 March 2018

Reaction RXN-15013

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA[c] <=> 1 3-hydroxypimeloyl-CoA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CENTBENZCOA-PWY, benzoyl-CoA degradation II (anaerobic): CENTBENZCOA-PWY
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate): PWY-7401
    • 5 reactions found over 17 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15013&oldid=43258"