Difference between revisions of "1.3.7.3-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_8988 == * right end position: ** 1086 * transcription direction: ** POSITIVE * left end position: ** 505 * centisome position: ** 5.1965427...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_8988 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] ==
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* right end position:
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* direction:
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** 1086
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.3.7.3 EC-1.3.7.3]
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* left end position:
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** 505
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* centisome position:
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** 5.1965427   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[1.1.1.274-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[1516-DIHYDROBILIVERDIN]][c] '''=>''' 1 [[3Z-PHYCOERYTHROBILIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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*** Assignment: ec-number
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* With common name(s):
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* Reaction: [[ALDEHYDE-REDUCTASE-RXN]]
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** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 15,16-dihydrobiliverdin[c] '''=>''' 1 (3Z)-phycoerythrobilin[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-12078]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_17350]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14102]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
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*** Assignment: ec-number
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[RXN-8772]]
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* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
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** Source: [[annotation-in-silico_annotation]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-8773]]
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* Category: [[orthology]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-5515]]
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* [[PWY-5516]]
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* [[PWY-6693]]
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* [[PWY-7165]]
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* [[KETOGLUCONMET-PWY]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=1086}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05819 R05819]
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{{#set: left end position=505}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=5.1965427    }}
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{{#set: ec number=EC-1.3.7.3}}
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{{#set: reaction associated=1.1.1.274-RXN|ALDEHYDE-REDUCTASE-RXN|RXN-12078|RXN-14102|RXN-8772|RXN-8773}}
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{{#set: gene associated=Tiso_gene_17350}}
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{{#set: pathway associated=PWY-5515|PWY-5516|PWY-6693|PWY-7165|KETOGLUCONMET-PWY}}
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{{#set: in pathway=PWY-5915|PWY-7579}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:41, 21 March 2018

Reaction 1.3.7.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5915, phycoerythrobilin biosynthesis I: PWY-5915
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7579, phycourobilin biosynthesis: PWY-7579
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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