Difference between revisions of "RXN-11989"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
 
* direction:
 
* direction:
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** REVERSIBLE
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** LEFT-TO-RIGHT
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* common name:
+
−
** atp-sulfurylase
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* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/2.7.7.4 EC-2.7.7.4]
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** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
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** 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-12935]][c] '''+''' 1 [[PRENAL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 sulfate[c] '''+''' 1 ATP[c] '''<=>''' 1 adenosine 5'-phosphosulfate[c] '''+''' 1 diphosphate[c]
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** 1 torulene[c] '''+''' 1 oxygen[c] '''=>''' 1 4'-apo-&beta;-carotenal[c] '''+''' 1 3-methyl-2-butenal[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_10254]]
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* Gene: [[Tiso_gene_4653]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
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−
** Source: [[orthology-athaliana]]
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−
** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_17879]]
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* Gene: [[Tiso_gene_7740]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[DISSULFRED-PWY]], sulfate reduction IV (dissimilatory, to hydrogen sufide)): [http://metacyc.org/META/NEW-IMAGE?object=DISSULFRED-PWY DISSULFRED-PWY]
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* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
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−
** '''2''' reactions found over '''2''' reactions in the full pathway
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−
* [[PWY-5278]], sulfite oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5278 PWY-5278]
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−
** '''1''' reactions found over '''2''' reactions in the full pathway
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−
* [[SULFMETII-PWY]], sulfate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6683]], sulfate reduction III (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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−
* [[P224-PWY]], sulfate reduction V (dissimilatory, to thiosulfate): [http://metacyc.org/META/NEW-IMAGE?object=P224-PWY P224-PWY]
+
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18133 18133]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
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* LIGAND-RXN:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
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{{#set: ec number=EC-1.13.11.59}}
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* UNIPROT:
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{{#set: gene associated=Tiso_gene_4653|Tiso_gene_7740}}
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** [http://www.uniprot.org/uniprot/Q12650 Q12650]
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{{#set: in pathway=PWY-6681}}
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** [http://www.uniprot.org/uniprot/O33581 O33581]
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{{#set: reconstruction category=orthology}}
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** [http://www.uniprot.org/uniprot/O34764 O34764]
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{{#set: reconstruction source=orthology-esiliculosus}}
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** [http://www.uniprot.org/uniprot/Q10600 Q10600]
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{{#set: reconstruction tool=pantograph}}
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** [http://www.uniprot.org/uniprot/O67174 O67174]
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** [http://www.uniprot.org/uniprot/P21156 P21156]
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** [http://www.uniprot.org/uniprot/O23324 O23324]
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** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
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** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
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** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
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** [http://www.uniprot.org/uniprot/P28604 P28604]
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** [http://www.uniprot.org/uniprot/Q27128 Q27128]
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** [http://www.uniprot.org/uniprot/P23845 P23845]
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** [http://www.uniprot.org/uniprot/O43252 O43252]
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** [http://www.uniprot.org/uniprot/Q43170 Q43170]
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** [http://www.uniprot.org/uniprot/Q43183 Q43183]
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** [http://www.uniprot.org/uniprot/Q43870 Q43870]
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−
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
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−
** [http://www.uniprot.org/uniprot/P08536 P08536]
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** [http://www.uniprot.org/uniprot/P74241 P74241]
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** [http://www.uniprot.org/uniprot/O48888 O48888]
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−
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
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** [http://www.uniprot.org/uniprot/Q96349 Q96349]
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** [http://www.uniprot.org/uniprot/Q96541 Q96541]
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** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
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** [http://www.uniprot.org/uniprot/P13441 P13441]
+
−
** [http://www.uniprot.org/uniprot/P13442 P13442]
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−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=atp-sulfurylase}}
+
−
{{#set: ec number=EC-2.7.7.4}}
+
−
{{#set: gene associated=Tiso_gene_10254|Tiso_gene_17879}}
+
−
{{#set: in pathway=DISSULFRED-PWY|PWY-5340|PWY-5278|SULFMETII-PWY|PWY-6683|P224-PWY}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus|orthology-synechocystis}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:42, 21 March 2018

Reaction RXN-11989

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 torulene[c] + 1 oxygen[c] => 1 4'-apo-β-carotenal[c] + 1 3-methyl-2-butenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6681, neurosporaxanthin biosynthesis: PWY-6681
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11989&oldid=43293"