Difference between revisions of "Tiso gene 17601"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** aldo-ket...")
(Created page with "Category:Gene == Gene Tiso_gene_17601 == * right end position: ** 3091 * transcription direction: ** NEGATIVE * left end position: ** 312 * centisome position: ** 8.69323...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] ==
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== Gene Tiso_gene_17601 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3091
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* common name:
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* transcription direction:
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** ORF
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** NEGATIVE
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** aldo-keto_reductase_family_4_member_c9_isoform_x2
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* left end position:
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* ec number:
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** 312
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** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
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* centisome position:
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** 8.69323   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRANSALDOL-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[ADENOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INOSINE]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 adenosine[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 inosine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_19373]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_18322]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-5723]]
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* [[P185-PWY]]
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* [[P124-PWY]]
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* [[PWY-1861]]
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* [[NONOXIPENT-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3091}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=312}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
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{{#set: centisome position=8.69323    }}
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* UNIPROT:
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{{#set: reaction associated=TRANSALDOL-RXN}}
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** [http://www.uniprot.org/uniprot/P22333 P22333]
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{{#set: pathway associated=PWY-5723|P185-PWY|P124-PWY|PWY-1861|NONOXIPENT-PWY}}
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** [http://www.uniprot.org/uniprot/P00813 P00813]
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** [http://www.uniprot.org/uniprot/P03958 P03958]
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** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
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** [http://www.uniprot.org/uniprot/P55266 P55266]
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** [http://www.uniprot.org/uniprot/P53984 P53984]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=aldo-keto_reductase_family_4_member_c9_isoform_x2}}
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{{#set: ec number=EC-3.5.4.4}}
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{{#set: gene associated=Tiso_gene_19373|Tiso_gene_18322}}
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{{#set: in pathway=PWY-6609|PWY0-1296|PWY-6611|SALVADEHYPOX-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:46, 21 March 2018

Gene Tiso_gene_17601

  • right end position:
    • 3091
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 312
  • centisome position:
    • 8.69323
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17601&oldid=43652"