Difference between revisions of "RXN-11842"

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(Created page with "Category:Gene == Gene Tiso_gene_9392 == * right end position: ** 8809 * transcription direction: ** POSITIVE * left end position: ** 6371 * centisome position: ** 67.87770...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11842 RXN-11842] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridine_synthase...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9392 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11842 RXN-11842] ==
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* right end position:
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* direction:
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** 8809
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** trna_pseudouridine_synthase
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* left end position:
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** trna_pseudouridinesynthase
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** 6371
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/5.4.99.28 EC-5.4.99.28]
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** 67.87770   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[2-DEHYDROPANTOATE-REDUCT-RXN]]
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* With identifiers:
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** 1 [[Uridine32-in-tRNA]][c] '''=>''' 1 [[tRNA-pseudouridine32]][c]
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* With common name(s):
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** 1 a uridine32 in tRNA[c] '''=>''' 1 a pseudouridine32 in tRNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_2988]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_9833]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4020]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_18959]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4021]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_11913]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_19622]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PANTO-PWY]]
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* [[PWY-6654]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=8809}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=trna_pseudouridine_synthase}}
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{{#set: left end position=6371}}
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{{#set: common name=trna_pseudouridinesynthase}}
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{{#set: centisome position=67.87770    }}
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{{#set: ec number=EC-5.4.99.28}}
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{{#set: reaction associated=2-DEHYDROPANTOATE-REDUCT-RXN}}
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{{#set: gene associated=Tiso_gene_2988|Tiso_gene_9833|Tiso_gene_4020|Tiso_gene_18959|Tiso_gene_4021|Tiso_gene_11913|Tiso_gene_19622}}
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{{#set: pathway associated=PANTO-PWY|PWY-6654}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:47, 21 March 2018

Reaction RXN-11842

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trna_pseudouridine_synthase
    • trna_pseudouridinesynthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11842&oldid=43722"