Difference between revisions of "Tiso gene 5014"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol_methyltransferase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_5014 == * right end position: ** 12902 * transcription direction: ** POSITIVE * left end position: ** 10293 * centisome position: ** 73.468...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] ==
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== Gene Tiso_gene_5014 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 12902
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* common name:
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* transcription direction:
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** sterol_methyltransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.1.41 EC-2.1.1.41]
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** 10293
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* centisome position:
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** 73.468956   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[CYCLOARTENOL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-696]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 cycloartenol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 24-methylenecycloartanol[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11849]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_11850]]
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* Reaction: [[UDPGtni]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_12590]]
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** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
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== Pathways ==
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== Pathways associated ==
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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** '''10''' reactions found over '''36''' reactions in the full pathway
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* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=12902}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07481 R07481]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=10293}}
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{{#set: common name=sterol_methyltransferase}}
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{{#set: centisome position=73.468956    }}
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{{#set: ec number=EC-2.1.1.41}}
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{{#set: reaction associated=ATPASE-RXN|UDPGtni}}
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{{#set: gene associated=Tiso_gene_11849|Tiso_gene_11850|Tiso_gene_12590}}
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{{#set: in pathway=PWY-2541|PWY-7155}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Gene Tiso_gene_5014

  • right end position:
    • 12902
  • transcription direction:
    • POSITIVE
  • left end position:
    • 10293
  • centisome position:
    • 73.468956
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5014&oldid=43753"