Difference between revisions of "PWY-7214"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == * direction: ** REVERSIBLE * common name: ** uroporphyrinogen_chloroplast *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7214 PWY-7214] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7214 PWY-7214] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** uroporphyrinogen_chloroplast
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** baicalein degradation (hydrogen peroxide detoxification)
** uroporphyrinogen_decarboxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[CPD-11444]][c] '''+''' 4 [[PROTON]][c] '''<=>''' 4 [[CARBON-DIOXIDE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_I]][c]
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* [[RXN-14240]]
* With common name(s):
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** 11 associated gene(s):
** 1 uroporphyrinogen-I[c] '''+''' 4 H+[c] '''<=>''' 4 CO2[c] '''+''' 1 coproporphyrinogen I[c]
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*** [[Tiso_gene_17551]]
 
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*** [[Tiso_gene_19683]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_5857]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_9359]]
* Gene: [[Tiso_gene_5173]]
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*** [[Tiso_gene_7067]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_20206]]
*** Assignment: EC-NUMBER
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*** [[Tiso_gene_16028]]
** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_15962]]
*** Assignment: EC-NUMBER
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*** [[Tiso_gene_11016]]
** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_15820]]
** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_6431]]
* Gene: [[Tiso_gene_18744]]
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** 2 reconstruction source(s) associated:
** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
*** Assignment: EC-NUMBER
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*** [[orthology-esiliculosus]]
** Source: [[orthology-esiliculosus]]
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== Reaction(s) not found ==
* Gene: [[Tiso_gene_18743]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11760 RXN-11760]
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19684]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-33090}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31239 31239]
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{{#set: common name=baicalein degradation (hydrogen peroxide detoxification)}}
* LIGAND-RXN:
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{{#set: reaction found=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R04972 R04972]
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{{#set: total reaction=2}}
{{#set: direction=REVERSIBLE}}
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{{#set: completion rate=50.0}}
{{#set: common name=uroporphyrinogen_chloroplast}}
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{{#set: common name=uroporphyrinogen_decarboxylase}}
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{{#set: ec number=EC-4.1.1.37}}
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{{#set: gene associated=Tiso_gene_5173|Tiso_gene_18744|Tiso_gene_18743|Tiso_gene_19684}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Pathway PWY-7214

  • taxonomic range:
  • common name:
    • baicalein degradation (hydrogen peroxide detoxification)
  • Synonym(s):

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links