Difference between revisions of "PWY0-1415"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BTUR2-RXN BTUR2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BTUR2-RXN BTUR2-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.5.1.17 EC-2.5.1.17]
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** superpathway of heme biosynthesis from uroporphyrinogen-III
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''6''' reactions in the full pathway
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** 1 [[COBINAMIDE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[P3I]][c] '''+''' 1 [[ADENOSYLCOBINAMIDE]][c]
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* [[HEMESYN2-PWY]]
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* With common name(s):
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** 0 associated gene:
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** 1 cobinamide[c] '''+''' 1 ATP[c] '''=>''' 1 PPPi[c] '''+''' 1 adenosylcobinamide[c]
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* [[PROTOHEMEFERROCHELAT-RXN]]
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** 2 associated gene(s):
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_3284]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_15900]]
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* Gene: [[Tiso_gene_6190]]
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** 6 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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* [[COBALSYN-PWY]], adenosylcobalamin salvage from cobinamide I: [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY]
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*** [[annotation-in-silico_annotation]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-athaliana]]
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* [[PWY-6269]], adenosylcobalamin salvage from cobinamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6269 PWY-6269]
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*** [[orthology-synechocystis]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-creinhardtii]]
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== Reconstruction information  ==
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* [[PROTOPORGENOXI-RXN]]
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* Category: [[orthology]]
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** 2 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_11986]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_15401]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[RXN0-1461]]
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** 5 associated gene(s):
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*** [[Tiso_gene_3671]]
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*** [[Tiso_gene_2247]]
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*** [[Tiso_gene_13364]]
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*** [[Tiso_gene_13365]]
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*** [[Tiso_gene_2246]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[UROGENDECARBOX-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18743]]
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*** [[Tiso_gene_19684]]
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*** [[Tiso_gene_18744]]
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*** [[Tiso_gene_5173]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14725 14725]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07268 R07268]
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{{#set: common name=superpathway of heme biosynthesis from uroporphyrinogen-III}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=5}}
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{{#set: ec number=EC-2.5.1.17}}
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{{#set: total reaction=6}}
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{{#set: gene associated=Tiso_gene_6190}}
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{{#set: completion rate=83.0}}
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{{#set: in pathway=COBALSYN-PWY|PWY-6269}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:48, 21 March 2018

Pathway PWY0-1415

  • taxonomic range:
  • common name:
    • superpathway of heme biosynthesis from uroporphyrinogen-III
  • Synonym(s):

Reaction(s) found

5 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-1415&oldid=43848"