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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Oxidized-Factor-F420 Oxidized-Factor-F420] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** oxidoreductase | + | ** an oxidized coenzyme F420 |
| − | ** ORF
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** an oxidized factor F420 |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 [[WATER]][c] '''+''' 1 [[CPD0-2352]][c] '''=>''' 1 [[tRNA-fragment]][c] '''+''' 1 [[CPD0-2353]][c]
| + | == Reaction(s) of unknown directionality == |
| − | * With common name(s):
| + | * [[COENZYME-F420-HYDROGENASE-RXN]] |
| − | ** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a short 3' extension[c] '''=>''' 1 a tRNA fragment[c] '''+''' 1 a tRNA precursor with a short 3' extension[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * Gene: [[Tiso_gene_14345]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_10972]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_3898]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_10971]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_14344]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | == Pathways == | + | |
| − | * [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
| + | |
| − | ** '''4''' reactions found over '''10''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]] | + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * UNIPROT:
| + | {{#set: common name=an oxidized coenzyme F420}} |
| − | ** [http://www.uniprot.org/uniprot/Q02773 Q02773]
| + | {{#set: common name=an oxidized factor F420}} |
| − | ** [http://www.uniprot.org/uniprot/P41812 P41812]
| + | {{#set: reversible reaction associated=COENZYME-F420-HYDROGENASE-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P0A5X8 P0A5X8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P48206 P48206]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JW46 Q9JW46]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PNX5 Q9PNX5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CJ73 Q9CJ73]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P29433 P29433]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P25817 P25817]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P22835 P22835]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P25814 P25814]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A7Y8 P0A7Y8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q55005 Q55005]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=oxidoreductase}} | + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: ec number=EC-3.1.26.5}} | + | |
| − | {{#set: gene associated=Tiso_gene_14345|Tiso_gene_10972|Tiso_gene_3898|Tiso_gene_10971|Tiso_gene_14344}}
| + | |
| − | {{#set: in pathway=PWY0-1479}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
