Difference between revisions of "RXN-717"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-717 RXN-717] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With iden...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-717 RXN-717] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** polyketide_synthase
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
 
* Synonym(s):
 
* Synonym(s):
−
** D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
 
−
** β-hydroxypalmitoyl-acyl carrier protein dehydrase
 
−
** β-hydroxypalmitoyl thioester dehydratase
 
−
** β-hydroxypalmityl-ACP dehydrase
 
−
** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
 
−
** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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** 1 [[CPD-716]][c] '''+''' 1 [[Acceptor]][c] '''=>''' 1 [[CPD-718]][c] '''+''' 1 [[Donor-H2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxypalmitoyl-[acp][c] '''=>''' 1 a trans hexadecenoyl-[acp][c] '''+''' 1 H2O[c]
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** 1 teasterone[c] '''+''' 1 an oxidized electron acceptor[c] '''=>''' 1 3-dehydroteasterone[c] '''+''' 1 a reduced electron acceptor[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_136]]
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* Gene: [[Tiso_gene_8263]]
−
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
−
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3577]]
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* Gene: [[Tiso_gene_13394]]
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** Source: [[orthology-esiliculosus]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_6884]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_135]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_500]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_10876]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[PWY-699]], brassinosteroid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699]
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''11''' reactions found over '''25''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
+
* Category: [[orthology]]
−
** Source: [[manual-primary_network]]
+
** Source: [[orthology-esiliculosus]]
−
* Category: [[annotation]]
+
*** Tool: [[pantograph]]
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04462 R04462]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07444 R07444]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P49327 P49327]
+
−
** [http://www.uniprot.org/uniprot/P07149 P07149]
+
−
** [http://www.uniprot.org/uniprot/P12276 P12276]
+
−
** [http://www.uniprot.org/uniprot/P12785 P12785]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: gene associated=Tiso_gene_8263|Tiso_gene_3577}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: in pathway=PWY-699}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: ec number=EC-4.2.1.59}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: common name=D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase|β-hydroxypalmitoyl-acyl carrier protein dehydrase|β-hydroxypalmitoyl thioester dehydratase|β-hydroxypalmityl-ACP dehydrase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: gene associated=Tiso_gene_136|Tiso_gene_13394|Tiso_gene_6884|Tiso_gene_135|Tiso_gene_500|Tiso_gene_10876}}
+
−
{{#set: in pathway=PWY-5971|PWY-5994}}
+
−
{{#set: reconstruction category=manual|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:49, 21 March 2018

Reaction RXN-717

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 teasterone[c] + 1 an oxidized electron acceptor[c] => 1 3-dehydroteasterone[c] + 1 a reduced electron acceptor[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-699, brassinosteroid biosynthesis I: PWY-699
    • 11 reactions found over 25 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-717&oldid=44035"