Difference between revisions of "RXN-16134"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** rutin biosynthesis
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** acyl-coenzyme_a_oxidase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
* [[RXN-527]]
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** 1 [[CPD-17385]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-17386]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_3330]]
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** 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Genes associated with this reaction  ==
*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
== Reaction(s) not found ==
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* Gene: [[Tiso_gene_18566]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8449 RXN-8449]
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** Source: [[annotation-in-silico_annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-462 RXN1F-462]
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*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 +
** '''14''' reactions found over '''14''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-3398}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=rutin biosynthesis}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
{{#set: reaction found=1}}
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{{#set: ec number=EC-1.3.3.6}}
{{#set: total reaction=3}}
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{{#set: gene associated=Tiso_gene_18566}}
{{#set: completion rate=33.0}}
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{{#set: in pathway=PWY-7606}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:50, 21 March 2018

Reaction RXN-16134

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 oxygen[c] => 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] + 1 hydrogen peroxide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links