Difference between revisions of "PWY-7092"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/6.3.4.18 EC-6.3.4.18]
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** neolinustatin bioactivation
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
** 1 [[HCO3]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Pi]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CPD0-181]][c] '''+''' 1 [[ADP]][c]
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* [[RXN-13603]]
* With common name(s):
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** 14 associated gene(s):
** 1 hydrogencarbonate[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''+''' 1 ATP[c] '''=>''' 1 phosphate[c] '''+''' 2 H+[c] '''+''' 1 N5-carboxyaminoimidazole ribonucleotide[c] '''+''' 1 ADP[c]
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*** [[Tiso_gene_15067]]
 
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*** [[Tiso_gene_6188]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_3467]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_6007]]
* Gene: [[Tiso_gene_16011]]
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*** [[Tiso_gene_13306]]
** Source: [[orthology-synechocystis]]
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*** [[Tiso_gene_13305]]
== Pathways  ==
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*** [[Tiso_gene_5836]]
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
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*** [[Tiso_gene_8669]]
** '''5''' reactions found over '''6''' reactions in the full pathway
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*** [[Tiso_gene_2843]]
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
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*** [[Tiso_gene_10001]]
** '''4''' reactions found over '''6''' reactions in the full pathway
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*** [[Tiso_gene_6497]]
== Reconstruction information  ==
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*** [[Tiso_gene_2344]]
* Category: [[orthology]]
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*** [[Tiso_gene_15066]]
** Source: [[orthology-synechocystis]]
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*** [[Tiso_gene_6187]]
*** Tool: [[pantograph]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-9674]]
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** 14 associated gene(s):
 +
*** [[Tiso_gene_15066]]
 +
*** [[Tiso_gene_13306]]
 +
*** [[Tiso_gene_3467]]
 +
*** [[Tiso_gene_2344]]
 +
*** [[Tiso_gene_6497]]
 +
*** [[Tiso_gene_8669]]
 +
*** [[Tiso_gene_2843]]
 +
*** [[Tiso_gene_6007]]
 +
*** [[Tiso_gene_10001]]
 +
*** [[Tiso_gene_6188]]
 +
*** [[Tiso_gene_13305]]
 +
*** [[Tiso_gene_6187]]
 +
*** [[Tiso_gene_15067]]
 +
*** [[Tiso_gene_5836]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11733 RXN-11733]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-58024}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19317 19317]
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{{#set: common name=neolinustatin bioactivation}}
* LIGAND-RXN:
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{{#set: reaction found=2}}
** [http://www.genome.jp/dbget-bin/www_bget?R07404 R07404]
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{{#set: total reaction=3}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=67.0}}
{{#set: ec number=EC-6.3.4.18}}
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{{#set: gene associated=Tiso_gene_16011}}
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{{#set: in pathway=PWY-6123|PWY-7234}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:50, 21 March 2018

Pathway PWY-7092

  • taxonomic range:
  • common name:
    • neolinustatin bioactivation
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links