Difference between revisions of "RXN-17798"

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(Created page with "Category:Gene == Gene Tiso_gene_11659 == * right end position: ** 7408 * transcription direction: ** POSITIVE * left end position: ** 103 * centisome position: ** 1.349227...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17798 RXN-17798] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11659 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17798 RXN-17798] ==
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* right end position:
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* direction:
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** 7408
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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* left end position:
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** 3-hydroxyacyl-_dehydrogenase
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** 103
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** hydroxyacyl-coenzyme_a_mitochondrial
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* centisome position:
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* ec number:
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** 1.3492272   
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
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* With identifiers:
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** 1 [[CPD-19151]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-19153]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 3-oxo-(5Z)-dodecenoyl-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14026]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18838]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18839]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_5857]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[H2PTEROATESYNTH-RXN]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-synechocystis]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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** Source: [[orthology-creinhardtii]]
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== Reconstruction information  ==
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* Reaction: [[R00939]]
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* Category: [[annotation]]
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** Source: [[orthology-synechocystis]]
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* Reaction: [[RXN-14226]]
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** Source: [[orthology-synechocystis]]
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* Reaction: [[RXN-15733]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[PWY-6148]]
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* [[PWY-7539]]
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* [[PWY-6614]]
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* [[PWY-6797]]
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* [[PWY-6147]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=7408}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: left end position=103}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: centisome position=1.3492272    }}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: reaction associated=H2PTERIDINEPYROPHOSPHOKIN-RXN|H2PTEROATESYNTH-RXN|R00939|RXN-14226|RXN-15733}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: pathway associated=PWY-6148|PWY-7539|PWY-6614|PWY-6797|PWY-6147}}
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{{#set: gene associated=Tiso_gene_14262|Tiso_gene_14026|Tiso_gene_18838|Tiso_gene_18839|Tiso_gene_5857}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction RXN-17798

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c] + 1 NAD+[c] => 1 3-oxo-(5Z)-dodecenoyl-CoA[c] + 1 NADH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17798&oldid=44504"