Difference between revisions of "RXN-7657"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOSINE SPHINGOSINE] == * smiles: ** CCCCCCCCCCCCCC=CC(O)C([N+])CO * common name: ** sphing...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** ORF * ec...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOSINE SPHINGOSINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCC=CC(O)C([N+])CO
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** REVERSIBLE
 
* common name:
 
* common name:
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** sphingosine
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** polyketide_synthase
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* inchi key:
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** ORF
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** InChIKey=WWUZIQQURGPMPG-KRWOKUGFSA-O
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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** 300.504   
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* Synonym(s):
 
* Synonym(s):
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** sphingenine
 
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** (4E)-sphing-4-enine
 
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** D-erythro-sphingosine
 
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** 2-amino-4-octadecene-1,3-diol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN3DJ-11417]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NAD]][c] '''+''' 1 [[ISOBUTANOL]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-7000]][c] '''+''' 1 [[PROTON]][c]
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* [[CERAMIDASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 NAD+[c] '''+''' 1 isobutanol[c] '''<=>''' 1 NADH[c] '''+''' 1 isobutanal[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6562]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5425]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_7649]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6563]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5424]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=REVERSIBLE}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878424 46878424]
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{{#set: common name=polyketide_synthase}}
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* HMDB : HMDB00252
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{{#set: common name=ORF}}
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* LIGAND-CPD:
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{{#set: ec number=EC-1.1.1.1}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00319 C00319]
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{{#set: gene associated=Tiso_gene_6562|Tiso_gene_5425|Tiso_gene_7649|Tiso_gene_6563|Tiso_gene_5424}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-7396|PWY-7111|PWY-5057}}
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** [http://www.chemspider.com/Chemical-Structure.4444047.html 4444047]
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{{#set: reconstruction category=annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57756 57756]
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{{#set: reconstruction tool=pathwaytools}}
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* METABOLIGHTS : MTBLC57756
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{{#set: smiles=CCCCCCCCCCCCCC=CC(O)C([N+])CO}}
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{{#set: common name=sphingosine}}
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{{#set: inchi key=InChIKey=WWUZIQQURGPMPG-KRWOKUGFSA-O}}
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{{#set: molecular weight=300.504    }}
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{{#set: common name=sphingenine|(4E)-sphing-4-enine|D-erythro-sphingosine|2-amino-4-octadecene-1,3-diol}}
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{{#set: consumed by=RXN3DJ-11417}}
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{{#set: produced by=CERAMIDASE-RXN}}
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Latest revision as of 19:55, 21 March 2018

Reaction RXN-7657

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 isobutanol[c] <=> 1 NADH[c] + 1 isobutanal[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7396, butanol and isobutanol biosynthesis (engineered): PWY-7396
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7111, pyruvate fermentation to isobutanol (engineered): PWY-7111
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5057, L-valine degradation II: PWY-5057
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7657&oldid=44634"